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MAGEA8 (MAGE family member A8)

Identity

Alias_namesMAGE8
melanoma antigen family A8
Alias_symbol (synonym)MGC2182
CT1.8
HGNC (Hugo) MAGEA8
LocusID (NCBI) 4107
Atlas_Id 41251
Location Xq28  [Link to chromosome band Xq28]
Location_base_pair Starts at 149009941 and ends at 149014609 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
FN1 (2q35) / MAGEA8 (Xq28)YLPM1 (14q24.3) / MAGEA8 (Xq28)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MAGEA8   6806
Cards
Entrez_Gene (NCBI)MAGEA8  4107  MAGE family member A8
AliasesCT1.8; MAGE8
GeneCards (Weizmann)MAGEA8
Ensembl hg19 (Hinxton)ENSG00000156009 [Gene_View]  chrX:149009941-149014609 [Contig_View]  MAGEA8 [Vega]
Ensembl hg38 (Hinxton)ENSG00000156009 [Gene_View]  chrX:149009941-149014609 [Contig_View]  MAGEA8 [Vega]
ICGC DataPortalENSG00000156009
TCGA cBioPortalMAGEA8
AceView (NCBI)MAGEA8
Genatlas (Paris)MAGEA8
WikiGenes4107
SOURCE (Princeton)MAGEA8
Genetics Home Reference (NIH)MAGEA8
Genomic and cartography
GoldenPath hg19 (UCSC)MAGEA8  -     chrX:149009941-149014609 +  Xq28   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MAGEA8  -     Xq28   [Description]    (hg38-Dec_2013)
EnsemblMAGEA8 - Xq28 [CytoView hg19]  MAGEA8 - Xq28 [CytoView hg38]
Mapping of homologs : NCBIMAGEA8 [Mapview hg19]  MAGEA8 [Mapview hg38]
OMIM300341   
Gene and transcription
Genbank (Entrez)AA045817 AK313943 BC002455 BC012744 BC098120
RefSeq transcript (Entrez)NM_001166400 NM_001166401 NM_005364
RefSeq genomic (Entrez)NC_000023 NC_018934 NG_015868 NT_011681 NW_004929448
Consensus coding sequences : CCDS (NCBI)MAGEA8
Cluster EST : UnigeneHs.522803 [ NCBI ]
CGAP (NCI)Hs.522803
Alternative Splicing GalleryENSG00000156009
Gene ExpressionMAGEA8 [ NCBI-GEO ]   MAGEA8 [ EBI - ARRAY_EXPRESS ]   MAGEA8 [ SEEK ]   MAGEA8 [ MEM ]
Gene Expression Viewer (FireBrowse)MAGEA8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4107
GTEX Portal (Tissue expression)MAGEA8
Protein : pattern, domain, 3D structure
UniProt/SwissProtP43361   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP43361  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP43361
Splice isoforms : SwissVarP43361
PhosPhoSitePlusP43361
Domaine pattern : Prosite (Expaxy)MAGE (PS50838)   
Domains : Interpro (EBI)MAGE_N    MAGEA8    MHD_dom   
Domain families : Pfam (Sanger)MAGE (PF01454)    MAGE_N (PF12440)   
Domain families : Pfam (NCBI)pfam01454    pfam12440   
Conserved Domain (NCBI)MAGEA8
DMDM Disease mutations4107
Blocks (Seattle)MAGEA8
SuperfamilyP43361
Human Protein AtlasENSG00000156009
Peptide AtlasP43361
HPRD02278
IPIIPI00157174   
Protein Interaction databases
DIP (DOE-UCLA)P43361
IntAct (EBI)P43361
FunCoupENSG00000156009
BioGRIDMAGEA8
STRING (EMBL)MAGEA8
ZODIACMAGEA8
Ontologies - Pathways
QuickGOP43361
Ontology : AmiGOmolecular_function  protein binding  cellular_component  biological_process  
Ontology : EGO-EBImolecular_function  protein binding  cellular_component  biological_process  
NDEx NetworkMAGEA8
Atlas of Cancer Signalling NetworkMAGEA8
Wikipedia pathwaysMAGEA8
Orthology - Evolution
OrthoDB4107
GeneTree (enSembl)ENSG00000156009
Phylogenetic Trees/Animal Genes : TreeFamMAGEA8
HOVERGENP43361
HOGENOMP43361
Homologs : HomoloGeneMAGEA8
Homology/Alignments : Family Browser (UCSC)MAGEA8
Gene fusions - Rearrangements
Fusion Cancer (Beijing)FN1 [2q35]  -  MAGEA8 [Xq28]  [FUSC002252]  [FUSC002252]
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMAGEA8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MAGEA8
dbVarMAGEA8
ClinVarMAGEA8
1000_GenomesMAGEA8 
Exome Variant ServerMAGEA8
ExAC (Exome Aggregation Consortium)MAGEA8 (select the gene name)
Genetic variants : HAPMAP4107
Genomic Variants (DGV)MAGEA8 [DGVbeta]
DECIPHER (Syndromes)X:149009941-149014609  ENSG00000156009
CONAN: Copy Number AnalysisMAGEA8 
Mutations
ICGC Data PortalMAGEA8 
TCGA Data PortalMAGEA8 
Broad Tumor PortalMAGEA8
OASIS PortalMAGEA8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMAGEA8  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMAGEA8
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch MAGEA8
DgiDB (Drug Gene Interaction Database)MAGEA8
DoCM (Curated mutations)MAGEA8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MAGEA8 (select a term)
intoGenMAGEA8
Cancer3DMAGEA8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300341   
Orphanet
MedgenMAGEA8
Genetic Testing Registry MAGEA8
NextProtP43361 [Medical]
TSGene4107
GENETestsMAGEA8
Huge Navigator MAGEA8 [HugePedia]
snp3D : Map Gene to Disease4107
BioCentury BCIQMAGEA8
ClinGenMAGEA8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4107
Chemical/Pharm GKB GenePA30552
Clinical trialMAGEA8
Miscellaneous
canSAR (ICR)MAGEA8 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMAGEA8
EVEXMAGEA8
GoPubMedMAGEA8
iHOPMAGEA8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Nov 18 19:42:45 CET 2016

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