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MAGEB17 (melanoma antigen family B, 17)

Identity

Other names-
HGNC (Hugo) MAGEB17
LocusID (NCBI) 645864
Location Xp22.2
Location_base_pair Starts at 16185604 and ends at 16189516 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)MAGEB17   17418
Entrez_Gene (NCBI)MAGEB17  645864  melanoma antigen family B, 17
Cards
GeneCards (Weizmann)MAGEB17
Ensembl (Hinxton)ENSG00000182798 [Gene_View]  chrX:16185604-16189516 [Contig_View]  MAGEB17 [Vega]
AceView (NCBI)MAGEB17
Genatlas (Paris)MAGEB17
SOURCE (Stanford)NM_001277307
Genomic and cartography
GoldenPath (UCSC)MAGEB17  -  Xp22.2   chrX:16185604-16189516 +  Xp22.2   [Description]    (hg19-Feb_2009)
EnsemblMAGEB17 - Xp22.2 [CytoView]
Mapping of homologs : NCBIMAGEB17 [Mapview]
OMIM300763   
Gene and transcription
Genbank (Entrez)DV080535
RefSeq transcript (SRS)NM_001277307
RefSeq transcript (Entrez)NM_001277307
RefSeq genomic (SRS)AC_000155 NC_000023 NC_018934 NT_167197 NW_001842360 NW_004078118
RefSeq genomic (Entrez)AC_000155 NC_000023 NC_018934 NT_167197 NW_001842360 NW_004078118
Consensus coding sequences : CCDS (NCBI)MAGEB17
Cluster EST : UnigeneHs.632792 [ SRS ] Hs.632792 [ NCBI ]
CGAP (NCI)Hs.632792
Alternative Splicing GalleryENSG00000182798
Gene ExpressionMAGEB17 [ NCBI-GEO ]   MAGEB17 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA8MXT2 (SRS) A8MXT2 (Uniprot)
NextProtA8MXT2
With graphics : InterProA8MXT2
Splice isoforms : SwissVarA8MXT2(Swissvar)
Domaine pattern : Prosite (SRS)MAGE (PS50838)   
Domaine pattern : Prosite (Expaxy)MAGE (PS50838)   
Domains : Interpro (SRS)MAGE    Melanoma_ass_antigen_N   
Domains : Interpro (EBI)MAGE    Melanoma_ass_antigen_N   
Related proteins : CluSTrA8MXT2
Domain families : Pfam (SRS)MAGE (PF01454)    MAGE_N (PF12440)   
Domain families : Pfam (Sanger)MAGE (PF01454)    MAGE_N (PF12440)   
Domain families : Pfam (NCBI)pfam01454    pfam12440   
DMDM645864
Blocks (Seattle)A8MXT2
Human Protein AtlasENSG00000182798
IPIIPI00046955   
Protein Interaction databases
DIP (DOE-UCLA)A8MXT2
IntAct (EBI)A8MXT2
FunCoupENSG00000182798
REACTOMEMAGEB17
Protein Interaction Database645864
BioGRIDMAGEB17
InParanoidA8MXT2
Interologous Interaction database A8MXT2
IntegromeDBMAGEB17
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)MAGEB17
SNP (GeneSNP Utah)MAGEB17
SNP : HGBaseMAGEB17
Genetic variants : HAPMAPMAGEB17
Somatic Mutations in Cancer : COSMICMAGEB17 
CONAN: Copy Number AnalysisMAGEB17 
Mutations and Diseases : HGMDMAGEB17
OMIM300763   
GENETests300763   
Disease Genetic AssociationMAGEB17
Huge Navigator MAGEB17 [HugePedia]  MAGEB17 [HugeCancerGEM]
Genomic VariantsMAGEB17  MAGEB17 [DGVbeta]
ClinVarMAGEB17
snp3D : Map Gene to Disease645864
General knowledge
Homologs : HomoloGeneMAGEB17
Homology/Alignments : Family Browser (UCSC)MAGEB17
Phylogenetic Trees/Animal Genes : TreeFamMAGEB17
Chemical/Protein Interactions : CTD645864
Chemical/Pharm GKB GenePA134872991
Clinical trialMAGEB17
Cancer Resource (Charite)ENSG00000182798
Ontology : AmiGO
Ontology : EGO-EBI
Other databases
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
PubGeneMAGEB17
iHOPMAGEB17
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:43:37 CEST 2013
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