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MAGEB6 (MAGE family member B6)

Identity

Alias_namesmember 4
Alias_symbol (synonym)FLJ40242
MAGE-B6
MAGEB6A
CT3.4
Other alias
HGNC (Hugo) MAGEB6
LocusID (NCBI) 158809
Atlas_Id 41258
Location Xp21.3  [Link to chromosome band Xp21]
Location_base_pair Starts at 26192440 and ends at 26195646 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MAGEB6   23796
Cards
Entrez_Gene (NCBI)MAGEB6  158809  MAGE family member B6
AliasesCT3.4; MAGE-B6; MAGEB6A
GeneCards (Weizmann)MAGEB6
Ensembl hg19 (Hinxton)ENSG00000176746 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176746 [Gene_View]  chrX:26192440-26195646 [Contig_View]  MAGEB6 [Vega]
ICGC DataPortalENSG00000176746
TCGA cBioPortalMAGEB6
AceView (NCBI)MAGEB6
Genatlas (Paris)MAGEB6
WikiGenes158809
SOURCE (Princeton)MAGEB6
Genetics Home Reference (NIH)MAGEB6
Genomic and cartography
GoldenPath hg38 (UCSC)MAGEB6  -     chrX:26192440-26195646 +  Xp21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MAGEB6  -     Xp21.3   [Description]    (hg19-Feb_2009)
EnsemblMAGEB6 - Xp21.3 [CytoView hg19]  MAGEB6 - Xp21.3 [CytoView hg38]
Mapping of homologs : NCBIMAGEB6 [Mapview hg19]  MAGEB6 [Mapview hg38]
OMIM300467   
Gene and transcription
Genbank (Entrez)AK097561 BC067286 BC074920 HQ447468
RefSeq transcript (Entrez)NM_173523
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MAGEB6
Cluster EST : UnigeneHs.376011 [ NCBI ]
CGAP (NCI)Hs.376011
Alternative Splicing GalleryENSG00000176746
Gene ExpressionMAGEB6 [ NCBI-GEO ]   MAGEB6 [ EBI - ARRAY_EXPRESS ]   MAGEB6 [ SEEK ]   MAGEB6 [ MEM ]
Gene Expression Viewer (FireBrowse)MAGEB6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)158809
GTEX Portal (Tissue expression)MAGEB6
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N7X4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N7X4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N7X4
Splice isoforms : SwissVarQ8N7X4
PhosPhoSitePlusQ8N7X4
Domaine pattern : Prosite (Expaxy)MAGE (PS50838)   
Domains : Interpro (EBI)MAGE_N    MHD_dom   
Domain families : Pfam (Sanger)MAGE (PF01454)    MAGE_N (PF12440)   
Domain families : Pfam (NCBI)pfam01454    pfam12440   
Domain families : Smart (EMBL)MAGE (SM01373)  MAGE_N (SM01392)  
Conserved Domain (NCBI)MAGEB6
DMDM Disease mutations158809
Blocks (Seattle)MAGEB6
SuperfamilyQ8N7X4
Human Protein AtlasENSG00000176746
Peptide AtlasQ8N7X4
HPRD06628
IPIIPI00297989   
Protein Interaction databases
DIP (DOE-UCLA)Q8N7X4
IntAct (EBI)Q8N7X4
FunCoupENSG00000176746
BioGRIDMAGEB6
STRING (EMBL)MAGEB6
ZODIACMAGEB6
Ontologies - Pathways
QuickGOQ8N7X4
Ontology : AmiGOmolecular_function  protein binding  cellular_component  biological_process  
Ontology : EGO-EBImolecular_function  protein binding  cellular_component  biological_process  
NDEx NetworkMAGEB6
Atlas of Cancer Signalling NetworkMAGEB6
Wikipedia pathwaysMAGEB6
Orthology - Evolution
OrthoDB158809
GeneTree (enSembl)ENSG00000176746
Phylogenetic Trees/Animal Genes : TreeFamMAGEB6
HOVERGENQ8N7X4
HOGENOMQ8N7X4
Homologs : HomoloGeneMAGEB6
Homology/Alignments : Family Browser (UCSC)MAGEB6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMAGEB6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MAGEB6
dbVarMAGEB6
ClinVarMAGEB6
1000_GenomesMAGEB6 
Exome Variant ServerMAGEB6
ExAC (Exome Aggregation Consortium)MAGEB6 (select the gene name)
Genetic variants : HAPMAP158809
Genomic Variants (DGV)MAGEB6 [DGVbeta]
DECIPHERMAGEB6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMAGEB6 
Mutations
ICGC Data PortalMAGEB6 
TCGA Data PortalMAGEB6 
Broad Tumor PortalMAGEB6
OASIS PortalMAGEB6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMAGEB6  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMAGEB6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch MAGEB6
DgiDB (Drug Gene Interaction Database)MAGEB6
DoCM (Curated mutations)MAGEB6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MAGEB6 (select a term)
intoGenMAGEB6
Cancer3DMAGEB6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300467   
Orphanet
MedgenMAGEB6
Genetic Testing Registry MAGEB6
NextProtQ8N7X4 [Medical]
TSGene158809
GENETestsMAGEB6
Target ValidationMAGEB6
Huge Navigator MAGEB6 [HugePedia]
snp3D : Map Gene to Disease158809
BioCentury BCIQMAGEB6
ClinGenMAGEB6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD158809
Chemical/Pharm GKB GenePA134864191
Clinical trialMAGEB6
Miscellaneous
canSAR (ICR)MAGEB6 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMAGEB6
EVEXMAGEB6
GoPubMedMAGEB6
iHOPMAGEB6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:06:09 CEST 2017

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