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MAGEE1 (MAGE family member E1)

Identity

Alias_namesmelanoma antigen family E1
Alias_symbol (synonym)KIAA1587
DAMAGE
Other aliasHCA1
HGNC (Hugo) MAGEE1
LocusID (NCBI) 57692
Atlas_Id 41066
Location Xq13.3  [Link to chromosome band Xq13]
Location_base_pair Starts at 76427653 and ends at 76431353 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MAGEE1   24934
Cards
Entrez_Gene (NCBI)MAGEE1  57692  MAGE family member E1
AliasesDAMAGE; HCA1
GeneCards (Weizmann)MAGEE1
Ensembl hg19 (Hinxton)ENSG00000198934 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198934 [Gene_View]  chrX:76427653-76431353 [Contig_View]  MAGEE1 [Vega]
ICGC DataPortalENSG00000198934
TCGA cBioPortalMAGEE1
AceView (NCBI)MAGEE1
Genatlas (Paris)MAGEE1
WikiGenes57692
SOURCE (Princeton)MAGEE1
Genetics Home Reference (NIH)MAGEE1
Genomic and cartography
GoldenPath hg38 (UCSC)MAGEE1  -     chrX:76427653-76431353 +  Xq13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MAGEE1  -     Xq13.3   [Description]    (hg19-Feb_2009)
EnsemblMAGEE1 - Xq13.3 [CytoView hg19]  MAGEE1 - Xq13.3 [CytoView hg38]
Mapping of homologs : NCBIMAGEE1 [Mapview hg19]  MAGEE1 [Mapview hg38]
OMIM300759   
Gene and transcription
Genbank (Entrez)AB046807 AF320909 AF490507 AK291270 BC050588
RefSeq transcript (Entrez)NM_020932
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MAGEE1
Cluster EST : UnigeneHs.8453 [ NCBI ]
CGAP (NCI)Hs.8453
Alternative Splicing GalleryENSG00000198934
Gene ExpressionMAGEE1 [ NCBI-GEO ]   MAGEE1 [ EBI - ARRAY_EXPRESS ]   MAGEE1 [ SEEK ]   MAGEE1 [ MEM ]
Gene Expression Viewer (FireBrowse)MAGEE1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57692
GTEX Portal (Tissue expression)MAGEE1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HCI5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HCI5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HCI5
Splice isoforms : SwissVarQ9HCI5
PhosPhoSitePlusQ9HCI5
Domaine pattern : Prosite (Expaxy)MAGE (PS50838)   
Domains : Interpro (EBI)MHD_dom   
Domain families : Pfam (Sanger)MAGE (PF01454)   
Domain families : Pfam (NCBI)pfam01454   
Domain families : Smart (EMBL)MAGE (SM01373)  
Conserved Domain (NCBI)MAGEE1
DMDM Disease mutations57692
Blocks (Seattle)MAGEE1
PDB (SRS)2H5T   
PDB (PDBSum)2H5T   
PDB (IMB)2H5T   
PDB (RSDB)2H5T   
Structural Biology KnowledgeBase2H5T   
SCOP (Structural Classification of Proteins)2H5T   
CATH (Classification of proteins structures)2H5T   
SuperfamilyQ9HCI5
Human Protein AtlasENSG00000198934
Peptide AtlasQ9HCI5
HPRD06583
IPIIPI00015306   
Protein Interaction databases
DIP (DOE-UCLA)Q9HCI5
IntAct (EBI)Q9HCI5
FunCoupENSG00000198934
BioGRIDMAGEE1
STRING (EMBL)MAGEE1
ZODIACMAGEE1
Ontologies - Pathways
QuickGOQ9HCI5
Ontology : AmiGOprotein binding  nucleus  plasma membrane  biological_process  dystrophin-associated glycoprotein complex  dendrite  postsynaptic membrane  perinuclear region of cytoplasm  
Ontology : EGO-EBIprotein binding  nucleus  plasma membrane  biological_process  dystrophin-associated glycoprotein complex  dendrite  postsynaptic membrane  perinuclear region of cytoplasm  
NDEx NetworkMAGEE1
Atlas of Cancer Signalling NetworkMAGEE1
Wikipedia pathwaysMAGEE1
Orthology - Evolution
OrthoDB57692
GeneTree (enSembl)ENSG00000198934
Phylogenetic Trees/Animal Genes : TreeFamMAGEE1
HOVERGENQ9HCI5
HOGENOMQ9HCI5
Homologs : HomoloGeneMAGEE1
Homology/Alignments : Family Browser (UCSC)MAGEE1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMAGEE1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MAGEE1
dbVarMAGEE1
ClinVarMAGEE1
1000_GenomesMAGEE1 
Exome Variant ServerMAGEE1
ExAC (Exome Aggregation Consortium)MAGEE1 (select the gene name)
Genetic variants : HAPMAP57692
Genomic Variants (DGV)MAGEE1 [DGVbeta]
DECIPHERMAGEE1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMAGEE1 
Mutations
ICGC Data PortalMAGEE1 
TCGA Data PortalMAGEE1 
Broad Tumor PortalMAGEE1
OASIS PortalMAGEE1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMAGEE1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMAGEE1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch MAGEE1
DgiDB (Drug Gene Interaction Database)MAGEE1
DoCM (Curated mutations)MAGEE1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MAGEE1 (select a term)
intoGenMAGEE1
Cancer3DMAGEE1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300759   
Orphanet
MedgenMAGEE1
Genetic Testing Registry MAGEE1
NextProtQ9HCI5 [Medical]
TSGene57692
GENETestsMAGEE1
Target ValidationMAGEE1
Huge Navigator MAGEE1 [HugePedia]
snp3D : Map Gene to Disease57692
BioCentury BCIQMAGEE1
ClinGenMAGEE1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57692
Chemical/Pharm GKB GenePA164741999
Clinical trialMAGEE1
Miscellaneous
canSAR (ICR)MAGEE1 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMAGEE1
EVEXMAGEE1
GoPubMedMAGEE1
iHOPMAGEE1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:58:34 CEST 2017

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