Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MAGI2-IT1 (MAGI2 intronic transcript 1)

Identity

Alias_namesMAGI2-IT
MAGI2 intronic transcript (non-protein coding)
MAGI2 intronic transcript 1 (non-protein coding)
Alias_symbol (synonym)PR47
MAGI2IT
Other aliasMAGI2IT1
HGNC (Hugo) MAGI2-IT1
LocusID (NCBI) 266671
Atlas_Id 68761
Location 7q21.11  [Link to chromosome band 7q21]
Location_base_pair Starts at 78943807 and ends at 78944663 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)MAGI2-IT1   30058
Cards
Entrez_Gene (NCBI)MAGI2-IT1  266671  MAGI2 intronic transcript 1
AliasesMAGI2-IT; MAGI2IT; MAGI2IT1; PR47
GeneCards (Weizmann)MAGI2-IT1
Ensembl hg19 (Hinxton) [Gene_View]  chr7:78943807-78944663 [Contig_View]  MAGI2-IT1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:78943807-78944663 [Contig_View]  MAGI2-IT1 [Vega]
TCGA cBioPortalMAGI2-IT1
AceView (NCBI)MAGI2-IT1
Genatlas (Paris)MAGI2-IT1
WikiGenes266671
SOURCE (Princeton)MAGI2-IT1
Genetics Home Reference (NIH)MAGI2-IT1
Genomic and cartography
GoldenPath hg19 (UCSC)MAGI2-IT1  -     chr7:78943807-78944663 -  7q21.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MAGI2-IT1  -     7q21.11   [Description]    (hg38-Dec_2013)
EnsemblMAGI2-IT1 - 7q21.11 [CytoView hg19]  MAGI2-IT1 - 7q21.11 [CytoView hg38]
Mapping of homologs : NCBIMAGI2-IT1 [Mapview hg19]  MAGI2-IT1 [Mapview hg38]
OMIM608950   
Gene and transcription
Genbank (Entrez)AF521131
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MAGI2-IT1
Cluster EST : UnigeneHs.683780 [ NCBI ]
CGAP (NCI)Hs.683780
Gene ExpressionMAGI2-IT1 [ NCBI-GEO ]   MAGI2-IT1 [ EBI - ARRAY_EXPRESS ]   MAGI2-IT1 [ SEEK ]   MAGI2-IT1 [ MEM ]
Gene Expression Viewer (FireBrowse)MAGI2-IT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)266671
GTEX Portal (Tissue expression)MAGI2-IT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MAGI2-IT1
DMDM Disease mutations266671
Blocks (Seattle)MAGI2-IT1
IPIIPI00168822   
Protein Interaction databases
BioGRIDMAGI2-IT1
STRING (EMBL)MAGI2-IT1
ZODIACMAGI2-IT1
Ontologies - Pathways
Huge Navigator MAGI2-IT1 [HugePedia]
snp3D : Map Gene to Disease266671
BioCentury BCIQMAGI2-IT1
ClinGenMAGI2-IT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD266671
Clinical trialMAGI2-IT1
Miscellaneous
canSAR (ICR)MAGI2-IT1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMAGI2-IT1
EVEXMAGI2-IT1
GoPubMedMAGI2-IT1
iHOPMAGI2-IT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:27:34 CET 2017

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