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MAGI3 (membrane associated guanylate kinase, WW and PDZ domain containing 3)

Identity

Other namesMAGI-3
dJ730K3.2
HGNC (Hugo) MAGI3
LocusID (NCBI) 260425
Location 1p13.2
Location_base_pair Starts at 113933475 and ends at 114228545 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MAGI3   29647
Cards
Entrez_Gene (NCBI)MAGI3  260425  membrane associated guanylate kinase, WW and PDZ domain containing 3
GeneCards (Weizmann)MAGI3
Ensembl (Hinxton)ENSG00000081026 [Gene_View]  chr1:113933475-114228545 [Contig_View]  MAGI3 [Vega]
ICGC DataPortalENSG00000081026
AceView (NCBI)MAGI3
Genatlas (Paris)MAGI3
WikiGenes260425
SOURCE (Princeton)NM_001142782 NM_020965 NM_152900
Genomic and cartography
GoldenPath (UCSC)MAGI3  -  1p13.2   chr1:113933475-114228545 +  1p13.2   [Description]    (hg19-Feb_2009)
EnsemblMAGI3 - 1p13.2 [CytoView]
Mapping of homologs : NCBIMAGI3 [Mapview]
Gene and transcription
Genbank (Entrez)AA992863 AB046854 AF213259 AK026417 AK311589
RefSeq transcript (Entrez)NM_001142782 NM_020965 NM_152900
RefSeq genomic (Entrez)AC_000133 NC_000001 NC_018912 NT_032977 NW_001838594 NW_004929290
Consensus coding sequences : CCDS (NCBI)MAGI3
Cluster EST : UnigeneHs.486189 [ NCBI ]
CGAP (NCI)Hs.486189
Alternative Splicing : Fast-db (Paris)GSHG0000829
Alternative Splicing GalleryENSG00000081026
Gene ExpressionMAGI3 [ NCBI-GEO ]     MAGI3 [ SEEK ]   MAGI3 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5TCQ9 (Uniprot)
NextProtQ5TCQ9  [Medical]
With graphics : InterProQ5TCQ9
Splice isoforms : SwissVarQ5TCQ9 (Swissvar)
Domaine pattern : Prosite (Expaxy)GUANYLATE_KINASE_1 (PS00856)    GUANYLATE_KINASE_2 (PS50052)    PDZ (PS50106)    WW_DOMAIN_1 (PS01159)    WW_DOMAIN_2 (PS50020)   
Domains : Interpro (EBI)GK/Ca_channel_bsu    Guanylate_kin-like    Guanylate_kinase_CS    GVQW    P-loop_NTPase    PDZ    WW_dom   
Related proteins : CluSTrQ5TCQ9
Domain families : Pfam (Sanger)Guanylate_kin (PF00625)    GVQW (PF13900)    PDZ (PF00595)    WW (PF00397)   
Domain families : Pfam (NCBI)pfam00625    pfam13900    pfam00595    pfam00397   
Domain families : Smart (EMBL)GuKc (SM00072)  PDZ (SM00228)  WW (SM00456)  
DMDM Disease mutations260425
Blocks (Seattle)Q5TCQ9
PDB (SRS)3SOE   
PDB (PDBSum)3SOE   
PDB (IMB)3SOE   
PDB (RSDB)3SOE   
Human Protein AtlasENSG00000081026
Peptide AtlasQ5TCQ9
HPRD11290
IPIIPI00895871   IPI00387038   IPI00514954   IPI00170865   IPI00008382   IPI01011565   
Protein Interaction databases
DIP (DOE-UCLA)Q5TCQ9
IntAct (EBI)Q5TCQ9
FunCoupENSG00000081026
BioGRIDMAGI3
IntegromeDBMAGI3
STRING (EMBL)MAGI3
Ontologies - Pathways
QuickGOQ5TCQ9
Ontology : AmiGOguanylate kinase activity  frizzled binding  protein binding  ATP binding  nucleus  plasma membrane  tight junction  apoptotic process  membrane  viral process  intracellular signal transduction  positive regulation of JUN kinase activity  nucleotide phosphorylation  
Ontology : EGO-EBIguanylate kinase activity  frizzled binding  protein binding  ATP binding  nucleus  plasma membrane  tight junction  apoptotic process  membrane  viral process  intracellular signal transduction  positive regulation of JUN kinase activity  nucleotide phosphorylation  
Pathways : KEGGRap1 signaling pathway    Tight junction   
Protein Interaction DatabaseMAGI3
Wikipedia pathwaysMAGI3
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)MAGI3
SNP (GeneSNP Utah)MAGI3
SNP : HGBaseMAGI3
Genetic variants : HAPMAPMAGI3
1000_GenomesMAGI3 
ICGC programENSG00000081026 
CONAN: Copy Number AnalysisMAGI3 
Somatic Mutations in Cancer : COSMICMAGI3 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
DECIPHER (Syndromes)1:113933475-114228545
Mutations and Diseases : HGMDMAGI3
OMIM
MedgenMAGI3
GENETestsMAGI3
Disease Genetic AssociationMAGI3
Huge Navigator MAGI3 [HugePedia]  MAGI3 [HugeCancerGEM]
Genomic VariantsMAGI3  MAGI3 [DGVbeta]
Exome VariantMAGI3
dbVarMAGI3
ClinVarMAGI3
snp3D : Map Gene to Disease260425
General knowledge
Homologs : HomoloGeneMAGI3
Homology/Alignments : Family Browser (UCSC)MAGI3
Phylogenetic Trees/Animal Genes : TreeFamMAGI3
Chemical/Protein Interactions : CTD260425
Chemical/Pharm GKB GenePA142671485
Clinical trialMAGI3
Cancer Resource (Charite)ENSG00000081026
Other databases
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
CoreMineMAGI3
GoPubMedMAGI3
iHOPMAGI3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Nov 8 17:39:17 CET 2014

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