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MAJIN (membrane anchored junction protein)

Identity

Alias_namesC11orf85
chromosome 11 open reading frame 85
Other alias
HGNC (Hugo) MAJIN
LocusID (NCBI) 283129
Atlas_Id 78350
Location 11q13.1  [Link to chromosome band 11q13]
Location_base_pair Starts at 64938230 and ends at 64972091 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MAJIN   27441
Cards
Entrez_Gene (NCBI)MAJIN  283129  membrane anchored junction protein
AliasesC11orf85
GeneCards (Weizmann)MAJIN
Ensembl hg19 (Hinxton)ENSG00000168070 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000168070 [Gene_View]  chr11:64938230-64972091 [Contig_View]  MAJIN [Vega]
ICGC DataPortalENSG00000168070
TCGA cBioPortalMAJIN
AceView (NCBI)MAJIN
Genatlas (Paris)MAJIN
WikiGenes283129
SOURCE (Princeton)MAJIN
Genetics Home Reference (NIH)MAJIN
Genomic and cartography
GoldenPath hg38 (UCSC)MAJIN  -     chr11:64938230-64972091 -  11q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MAJIN  -     11q13.1   [Description]    (hg19-Feb_2009)
EnsemblMAJIN - 11q13.1 [CytoView hg19]  MAJIN - 11q13.1 [CytoView hg38]
Mapping of homologs : NCBIMAJIN [Mapview hg19]  MAJIN [Mapview hg38]
OMIM617130   
Gene and transcription
Genbank (Entrez)AK093130 AW449463 BC033501 BC106951 BC106952
RefSeq transcript (Entrez)NM_001037225 NM_001300803 NM_001318808
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MAJIN
Cluster EST : UnigeneHs.567793 [ NCBI ]
CGAP (NCI)Hs.567793
Alternative Splicing GalleryENSG00000168070
Gene ExpressionMAJIN [ NCBI-GEO ]   MAJIN [ EBI - ARRAY_EXPRESS ]   MAJIN [ SEEK ]   MAJIN [ MEM ]
Gene Expression Viewer (FireBrowse)MAJIN [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283129
GTEX Portal (Tissue expression)MAJIN
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3KP22   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ3KP22  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ3KP22
Splice isoforms : SwissVarQ3KP22
PhosPhoSitePlusQ3KP22
Domains : Interpro (EBI)MAJIN   
Domain families : Pfam (Sanger)MAJIN (PF15077)   
Domain families : Pfam (NCBI)pfam15077   
Conserved Domain (NCBI)MAJIN
DMDM Disease mutations283129
Blocks (Seattle)MAJIN
SuperfamilyQ3KP22
Human Protein AtlasENSG00000168070
Peptide AtlasQ3KP22
HPRD18761
IPIIPI00176776   IPI00978230   IPI00978825   IPI00978125   
Protein Interaction databases
DIP (DOE-UCLA)Q3KP22
IntAct (EBI)Q3KP22
FunCoupENSG00000168070
BioGRIDMAJIN
STRING (EMBL)MAJIN
ZODIACMAJIN
Ontologies - Pathways
QuickGOQ3KP22
Ontology : AmiGOnuclear chromosome, telomeric region  DNA binding  integral component of nuclear inner membrane  synapsis  meiotic telomere clustering  meiotic attachment of telomere to nuclear envelope  
Ontology : EGO-EBInuclear chromosome, telomeric region  DNA binding  integral component of nuclear inner membrane  synapsis  meiotic telomere clustering  meiotic attachment of telomere to nuclear envelope  
NDEx NetworkMAJIN
Atlas of Cancer Signalling NetworkMAJIN
Wikipedia pathwaysMAJIN
Orthology - Evolution
OrthoDB283129
GeneTree (enSembl)ENSG00000168070
Phylogenetic Trees/Animal Genes : TreeFamMAJIN
HOVERGENQ3KP22
HOGENOMQ3KP22
Homologs : HomoloGeneMAJIN
Homology/Alignments : Family Browser (UCSC)MAJIN
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMAJIN [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MAJIN
dbVarMAJIN
ClinVarMAJIN
1000_GenomesMAJIN 
Exome Variant ServerMAJIN
ExAC (Exome Aggregation Consortium)MAJIN (select the gene name)
Genetic variants : HAPMAP283129
Genomic Variants (DGV)MAJIN [DGVbeta]
DECIPHERMAJIN [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMAJIN 
Mutations
ICGC Data PortalMAJIN 
TCGA Data PortalMAJIN 
Broad Tumor PortalMAJIN
OASIS PortalMAJIN [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMAJIN
BioMutasearch MAJIN
DgiDB (Drug Gene Interaction Database)MAJIN
DoCM (Curated mutations)MAJIN (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MAJIN (select a term)
intoGenMAJIN
Cancer3DMAJIN(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617130   
Orphanet
MedgenMAJIN
Genetic Testing Registry MAJIN
NextProtQ3KP22 [Medical]
TSGene283129
GENETestsMAJIN
Target ValidationMAJIN
Huge Navigator MAJIN [HugePedia]
snp3D : Map Gene to Disease283129
BioCentury BCIQMAJIN
ClinGenMAJIN
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283129
Chemical/Pharm GKB GenePA162377786
Clinical trialMAJIN
Miscellaneous
canSAR (ICR)MAJIN (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMAJIN
EVEXMAJIN
GoPubMedMAJIN
iHOPMAJIN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:26:51 CEST 2017

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