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MAK16 (MAK16 homolog)

Identity

Alias (NCBI)MAK16L
RBM13
HGNC (Hugo) MAK16
HGNC Alias symbMAK16L
HGNC Previous nameRBM13
HGNC Previous nameRNA binding motif protein 13
 MAK16 homolog (S. cerevisiae)
LocusID (NCBI) 84549
Atlas_Id 68767
Location 8p12  [Link to chromosome band 8p12]
Location_base_pair Starts at 33485182 and ends at 33501262 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MAK16 (8p12)::ANGPT2 (8p23.1)RPS18 (6p21.32)::MAK16 (8p12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)MAK16   13703
Cards
Entrez_Gene (NCBI)MAK16    MAK16 homolog
AliasesMAK16L; RBM13
GeneCards (Weizmann)MAK16
Ensembl hg19 (Hinxton)ENSG00000198042 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198042 [Gene_View]  ENSG00000198042 [Sequence]  chr8:33485182-33501262 [Contig_View]  MAK16 [Vega]
ICGC DataPortalENSG00000198042
TCGA cBioPortalMAK16
AceView (NCBI)MAK16
Genatlas (Paris)MAK16
SOURCE (Princeton)MAK16
Genetics Home Reference (NIH)MAK16
Genomic and cartography
GoldenPath hg38 (UCSC)MAK16  -     chr8:33485182-33501262 +  8p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MAK16  -     8p12   [Description]    (hg19-Feb_2009)
GoldenPathMAK16 - 8p12 [CytoView hg19]  MAK16 - 8p12 [CytoView hg38]
ImmunoBaseENSG00000198042
Genome Data Viewer NCBIMAK16 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF251062 AK027469 AK225476 AK314491 AL049422
RefSeq transcript (Entrez)NM_032509
Consensus coding sequences : CCDS (NCBI)MAK16
Gene ExpressionMAK16 [ NCBI-GEO ]   MAK16 [ EBI - ARRAY_EXPRESS ]   MAK16 [ SEEK ]   MAK16 [ MEM ]
Gene Expression Viewer (FireBrowse)MAK16 [ Firebrowse - Broad ]
GenevisibleExpression of MAK16 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84549
GTEX Portal (Tissue expression)MAK16
Human Protein AtlasENSG00000198042-MAK16 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BXY0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BXY0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BXY0
PhosPhoSitePlusQ9BXY0
Domains : Interpro (EBI)L28e/Mak16    Mak16   
Domain families : Pfam (Sanger)Mak16 (PF04874)    Ribosomal_L28e (PF01778)   
Domain families : Pfam (NCBI)pfam04874    pfam01778   
Conserved Domain (NCBI)MAK16
SuperfamilyQ9BXY0
AlphaFold pdb e-kbQ9BXY0   
Human Protein Atlas [tissue]ENSG00000198042-MAK16 [tissue]
HPRD15223
Protein Interaction databases
DIP (DOE-UCLA)Q9BXY0
IntAct (EBI)Q9BXY0
BioGRIDMAK16
STRING (EMBL)MAK16
ZODIACMAK16
Ontologies - Pathways
QuickGOQ9BXY0
Ontology : AmiGOmaturation of 5.8S rRNA  maturation of LSU-rRNA  RNA binding  protein binding  nucleolus  nucleolus  preribosome, large subunit precursor  intracellular membrane-bounded organelle  
Ontology : EGO-EBImaturation of 5.8S rRNA  maturation of LSU-rRNA  RNA binding  protein binding  nucleolus  nucleolus  preribosome, large subunit precursor  intracellular membrane-bounded organelle  
NDEx NetworkMAK16
Atlas of Cancer Signalling NetworkMAK16
Wikipedia pathwaysMAK16
Orthology - Evolution
OrthoDB84549
GeneTree (enSembl)ENSG00000198042
Phylogenetic Trees/Animal Genes : TreeFamMAK16
Homologs : HomoloGeneMAK16
Homology/Alignments : Family Browser (UCSC)MAK16
Gene fusions - Rearrangements
Fusion : QuiverMAK16
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMAK16 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MAK16
dbVarMAK16
ClinVarMAK16
MonarchMAK16
1000_GenomesMAK16 
Exome Variant ServerMAK16
GNOMAD BrowserENSG00000198042
Varsome BrowserMAK16
ACMGMAK16 variants
VarityQ9BXY0
Genomic Variants (DGV)MAK16 [DGVbeta]
DECIPHERMAK16 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMAK16 
Mutations
ICGC Data PortalMAK16 
TCGA Data PortalMAK16 
Broad Tumor PortalMAK16
OASIS PortalMAK16 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMAK16  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DMAK16
Mutations and Diseases : HGMDMAK16
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaMAK16
DgiDB (Drug Gene Interaction Database)MAK16
DoCM (Curated mutations)MAK16
CIViC (Clinical Interpretations of Variants in Cancer)MAK16
Cancer3DMAK16
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETMAK16
MedgenMAK16
Genetic Testing Registry MAK16
NextProtQ9BXY0 [Medical]
GENETestsMAK16
Target ValidationMAK16
Huge Navigator MAK16 [HugePedia]
ClinGenMAK16
Clinical trials, drugs, therapy
MyCancerGenomeMAK16
Protein Interactions : CTDMAK16
Pharm GKB GenePA162394925
PharosQ9BXY0
Clinical trialMAK16
Miscellaneous
canSAR (ICR)MAK16
HarmonizomeMAK16
ARCHS4MAK16
DataMed IndexMAK16
Probes
Litterature
PubMed36 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMAK16
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sun Jan 16 19:10:00 CET 2022

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