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MAL2 (mal, T-cell differentiation protein 2 (gene/pseudogene))

Identity

Other alias-
HGNC (Hugo) MAL2
LocusID (NCBI) 114569
Atlas_Id 49874
Location 8q24.12  [Link to chromosome band 8q24]
Location_base_pair Starts at 120220610 and ends at 120257914 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
MAL2 (8q24.12) / P3H1 (1p34.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MAL2   13634
Cards
Entrez_Gene (NCBI)MAL2  114569  mal, T-cell differentiation protein 2 (gene/pseudogene)
Aliases
GeneCards (Weizmann)MAL2
Ensembl hg19 (Hinxton)ENSG00000147676 [Gene_View]  chr8:120220610-120257914 [Contig_View]  MAL2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000147676 [Gene_View]  chr8:120220610-120257914 [Contig_View]  MAL2 [Vega]
ICGC DataPortalENSG00000147676
TCGA cBioPortalMAL2
AceView (NCBI)MAL2
Genatlas (Paris)MAL2
WikiGenes114569
SOURCE (Princeton)MAL2
Genetics Home Reference (NIH)MAL2
Genomic and cartography
GoldenPath hg19 (UCSC)MAL2  -     chr8:120220610-120257914 +  8q24.12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MAL2  -     8q24.12   [Description]    (hg38-Dec_2013)
EnsemblMAL2 - 8q24.12 [CytoView hg19]  MAL2 - 8q24.12 [CytoView hg38]
Mapping of homologs : NCBIMAL2 [Mapview hg19]  MAL2 [Mapview hg38]
OMIM609684   
Gene and transcription
Genbank (Entrez)AK172820 AK312030 AL117612 AY007723 BC012367
RefSeq transcript (Entrez)NM_052886
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_008046 NW_004929340
Consensus coding sequences : CCDS (NCBI)MAL2
Cluster EST : UnigeneHs.201083 [ NCBI ]
CGAP (NCI)Hs.201083
Alternative Splicing GalleryENSG00000147676
Gene ExpressionMAL2 [ NCBI-GEO ]   MAL2 [ EBI - ARRAY_EXPRESS ]   MAL2 [ SEEK ]   MAL2 [ MEM ]
Gene Expression Viewer (FireBrowse)MAL2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)114569
GTEX Portal (Tissue expression)MAL2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ969L2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ969L2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ969L2
Splice isoforms : SwissVarQ969L2
PhosPhoSitePlusQ969L2
Domaine pattern : Prosite (Expaxy)MARVEL (PS51225)   
Domains : Interpro (EBI)MAL    Marvel   
Domain families : Pfam (Sanger)MARVEL (PF01284)   
Domain families : Pfam (NCBI)pfam01284   
Conserved Domain (NCBI)MAL2
DMDM Disease mutations114569
Blocks (Seattle)MAL2
SuperfamilyQ969L2
Human Protein AtlasENSG00000147676
Peptide AtlasQ969L2
HPRD14351
IPIIPI00056414   
Protein Interaction databases
DIP (DOE-UCLA)Q969L2
IntAct (EBI)Q969L2
FunCoupENSG00000147676
BioGRIDMAL2
STRING (EMBL)MAL2
ZODIACMAL2
Ontologies - Pathways
QuickGOQ969L2
Ontology : AmiGOprotein binding  endomembrane system  integral component of membrane  apical plasma membrane  membrane raft  perinuclear region of cytoplasm  extracellular exosome  
Ontology : EGO-EBIprotein binding  endomembrane system  integral component of membrane  apical plasma membrane  membrane raft  perinuclear region of cytoplasm  extracellular exosome  
NDEx NetworkMAL2
Atlas of Cancer Signalling NetworkMAL2
Wikipedia pathwaysMAL2
Orthology - Evolution
OrthoDB114569
GeneTree (enSembl)ENSG00000147676
Phylogenetic Trees/Animal Genes : TreeFamMAL2
HOVERGENQ969L2
HOGENOMQ969L2
Homologs : HomoloGeneMAL2
Homology/Alignments : Family Browser (UCSC)MAL2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMAL2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MAL2
dbVarMAL2
ClinVarMAL2
1000_GenomesMAL2 
Exome Variant ServerMAL2
ExAC (Exome Aggregation Consortium)MAL2 (select the gene name)
Genetic variants : HAPMAP114569
Genomic Variants (DGV)MAL2 [DGVbeta]
DECIPHER (Syndromes)8:120220610-120257914  ENSG00000147676
CONAN: Copy Number AnalysisMAL2 
Mutations
ICGC Data PortalMAL2 
TCGA Data PortalMAL2 
Broad Tumor PortalMAL2
OASIS PortalMAL2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMAL2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MAL2
DgiDB (Drug Gene Interaction Database)MAL2
DoCM (Curated mutations)MAL2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MAL2 (select a term)
intoGenMAL2
Cancer3DMAL2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609684   
Orphanet
MedgenMAL2
Genetic Testing Registry MAL2
NextProtQ969L2 [Medical]
TSGene114569
GENETestsMAL2
Huge Navigator MAL2 [HugePedia]
snp3D : Map Gene to Disease114569
BioCentury BCIQMAL2
ClinGenMAL2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD114569
Chemical/Pharm GKB GenePA30566
Clinical trialMAL2
Miscellaneous
canSAR (ICR)MAL2 (select the gene name)
Probes
Litterature
PubMed30 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMAL2
EVEXMAL2
GoPubMedMAL2
iHOPMAL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:08:22 CEST 2017

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