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MALL (mal, T cell differentiation protein like)

Identity

Alias (NCBI)BENE
HGNC (Hugo) MALL
HGNC Alias symbBENE
HGNC Previous namemal, T-cell differentiation protein like
LocusID (NCBI) 7851
Atlas_Id 53949
Location 2q13  [Link to chromosome band 2q13]
Location_base_pair Starts at 110083870 and ends at 110115822 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BMP1 (8p21.3) / MALL (2q13)HLA-E (6p21.33) / MALL (2q13)NPHP1 (2q13) / MALL (2q13)
PAK4 (19q13.2) / MALL (2q13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)MALL   6818
Cards
Entrez_Gene (NCBI)MALL    mal, T cell differentiation protein like
AliasesBENE
GeneCards (Weizmann)MALL
Ensembl hg19 (Hinxton)ENSG00000144063 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000144063 [Gene_View]  ENSG00000144063 [Sequence]  chr2:110083870-110115822 [Contig_View]  MALL [Vega]
ICGC DataPortalENSG00000144063
TCGA cBioPortalMALL
AceView (NCBI)MALL
Genatlas (Paris)MALL
SOURCE (Princeton)MALL
Genetics Home Reference (NIH)MALL
Genomic and cartography
GoldenPath hg38 (UCSC)MALL  -     chr2:110083870-110115822 -  2q13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MALL  -     2q13   [Description]    (hg19-Feb_2009)
GoldenPathMALL - 2q13 [CytoView hg19]  MALL - 2q13 [CytoView hg38]
ImmunoBaseENSG00000144063
Genome Data Viewer NCBIMALL [Mapview hg19]  
OMIM602022   
Gene and transcription
Genbank (Entrez)AI911238 AK056616 AK125647 AK311353 BC003179
RefSeq transcript (Entrez)NM_001371559 NM_001371560 NM_005434
Consensus coding sequences : CCDS (NCBI)MALL
Gene ExpressionMALL [ NCBI-GEO ]   MALL [ EBI - ARRAY_EXPRESS ]   MALL [ SEEK ]   MALL [ MEM ]
Gene Expression Viewer (FireBrowse)MALL [ Firebrowse - Broad ]
GenevisibleExpression of MALL in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7851
GTEX Portal (Tissue expression)MALL
Human Protein AtlasENSG00000144063-MALL [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ13021   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ13021  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ13021
PhosPhoSitePlusQ13021
Domaine pattern : Prosite (Expaxy)MARVEL (PS51225)   
Domains : Interpro (EBI)MAL    Marvel   
Domain families : Pfam (Sanger)MARVEL (PF01284)   
Domain families : Pfam (NCBI)pfam01284   
Conserved Domain (NCBI)MALL
SuperfamilyQ13021
AlphaFold pdb e-kbQ13021   
Human Protein Atlas [tissue]ENSG00000144063-MALL [tissue]
HPRD15997
Protein Interaction databases
DIP (DOE-UCLA)Q13021
IntAct (EBI)Q13021
BioGRIDMALL
STRING (EMBL)MALL
ZODIACMALL
Ontologies - Pathways
QuickGOQ13021
Ontology : AmiGOGolgi membrane  protein binding  plasma membrane  integral component of membrane  structural constituent of myelin sheath  clathrin-coated vesicle  cytoplasmic vesicle  myelination  cholesterol homeostasis  membrane raft  
Ontology : EGO-EBIGolgi membrane  protein binding  plasma membrane  integral component of membrane  structural constituent of myelin sheath  clathrin-coated vesicle  cytoplasmic vesicle  myelination  cholesterol homeostasis  membrane raft  
NDEx NetworkMALL
Atlas of Cancer Signalling NetworkMALL
Wikipedia pathwaysMALL
Orthology - Evolution
OrthoDB7851
GeneTree (enSembl)ENSG00000144063
Phylogenetic Trees/Animal Genes : TreeFamMALL
Homologs : HomoloGeneMALL
Homology/Alignments : Family Browser (UCSC)MALL
Gene fusions - Rearrangements
Fusion : QuiverMALL
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMALL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MALL
dbVarMALL
ClinVarMALL
MonarchMALL
1000_GenomesMALL 
Exome Variant ServerMALL
GNOMAD BrowserENSG00000144063
Varsome BrowserMALL
ACMGMALL variants
VarityQ13021
Genomic Variants (DGV)MALL [DGVbeta]
DECIPHERMALL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMALL 
Mutations
ICGC Data PortalMALL 
TCGA Data PortalMALL 
Broad Tumor PortalMALL
OASIS PortalMALL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMALL  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DMALL
Mutations and Diseases : HGMDMALL
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaMALL
DgiDB (Drug Gene Interaction Database)MALL
DoCM (Curated mutations)MALL
CIViC (Clinical Interpretations of Variants in Cancer)MALL
Cancer3DMALL
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602022   
Orphanet
DisGeNETMALL
MedgenMALL
Genetic Testing Registry MALL
NextProtQ13021 [Medical]
GENETestsMALL
Target ValidationMALL
Huge Navigator MALL [HugePedia]
ClinGenMALL
Clinical trials, drugs, therapy
MyCancerGenomeMALL
Protein Interactions : CTDMALL
Pharm GKB GenePA30567
PharosQ13021
Clinical trialMALL
Miscellaneous
canSAR (ICR)MALL
HarmonizomeMALL
DataMed IndexMALL
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMALL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:17:36 CEST 2021

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