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MAMDC2-AS1 (MAMDC2 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) MAMDC2-AS1
LocusID (NCBI) 100507244
Atlas_Id 68771
Location 9q21.12  [Link to chromosome band 9q21]
Location_base_pair Starts at 70153134 and ends at 70175888 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MAMDC2-AS1   48719
Cards
Entrez_Gene (NCBI)MAMDC2-AS1  100507244  MAMDC2 antisense RNA 1
Aliases
GeneCards (Weizmann)MAMDC2-AS1
Ensembl hg19 (Hinxton)ENSG00000204706 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204706 [Gene_View]  chr9:70153134-70175888 [Contig_View]  MAMDC2-AS1 [Vega]
ICGC DataPortalENSG00000204706
TCGA cBioPortalMAMDC2-AS1
AceView (NCBI)MAMDC2-AS1
Genatlas (Paris)MAMDC2-AS1
WikiGenes100507244
SOURCE (Princeton)MAMDC2-AS1
Genetics Home Reference (NIH)MAMDC2-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)MAMDC2-AS1  -     chr9:70153134-70175888 -  9q21.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MAMDC2-AS1  -     9q21.12   [Description]    (hg19-Feb_2009)
EnsemblMAMDC2-AS1 - 9q21.12 [CytoView hg19]  MAMDC2-AS1 - 9q21.12 [CytoView hg38]
Mapping of homologs : NCBIMAMDC2-AS1 [Mapview hg19]  MAMDC2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK124126 BC043510
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MAMDC2-AS1
Cluster EST : UnigeneHs.556816 [ NCBI ]
CGAP (NCI)Hs.556816
Alternative Splicing GalleryENSG00000204706
Gene ExpressionMAMDC2-AS1 [ NCBI-GEO ]   MAMDC2-AS1 [ EBI - ARRAY_EXPRESS ]   MAMDC2-AS1 [ SEEK ]   MAMDC2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)MAMDC2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100507244
GTEX Portal (Tissue expression)MAMDC2-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MAMDC2-AS1
DMDM Disease mutations100507244
Blocks (Seattle)MAMDC2-AS1
Human Protein AtlasENSG00000204706
IPIIPI00446390   
Protein Interaction databases
FunCoupENSG00000204706
BioGRIDMAMDC2-AS1
STRING (EMBL)MAMDC2-AS1
ZODIACMAMDC2-AS1
Ontologies - Pathways
Huge Navigator MAMDC2-AS1 [HugePedia]
snp3D : Map Gene to Disease100507244
BioCentury BCIQMAMDC2-AS1
ClinGenMAMDC2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100507244
Clinical trialMAMDC2-AS1
Miscellaneous
canSAR (ICR)MAMDC2-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineMAMDC2-AS1
EVEXMAMDC2-AS1
GoPubMedMAMDC2-AS1
iHOPMAMDC2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:25:25 CEST 2017

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