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MAP3K20-AS1 (MAP3K20 antisense RNA 1)

Identity

Alias_namesMLK7-AS1
MLK7 antisense RNA 1 (non-protein coding)
MLK7 antisense RNA 1
Other alias
HGNC (Hugo) MAP3K20-AS1
LocusID (NCBI) 339751
Atlas_Id 80065
Location 2q31.1  [Link to chromosome band 2q31]
Location_base_pair Starts at 173197713 and ends at 173282036 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MAP3K20-AS1   27935
Cards
Entrez_Gene (NCBI)MAP3K20-AS1  339751  MAP3K20 antisense RNA 1
AliasesMLK7-AS1
GeneCards (Weizmann)MAP3K20-AS1
Ensembl hg19 (Hinxton)ENSG00000238133 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000238133 [Gene_View]  chr2:173197713-173282036 [Contig_View]  MAP3K20-AS1 [Vega]
ICGC DataPortalENSG00000238133
TCGA cBioPortalMAP3K20-AS1
AceView (NCBI)MAP3K20-AS1
Genatlas (Paris)MAP3K20-AS1
WikiGenes339751
SOURCE (Princeton)MAP3K20-AS1
Genetics Home Reference (NIH)MAP2K:0-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)MAP3K20-AS1  -     chr2:173197713-173282036 -  2q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MAP3K20-AS1  -     2q31.1   [Description]    (hg19-Feb_2009)
EnsemblMAP3K20-AS1 - 2q31.1 [CytoView hg19]  MAP3K20-AS1 - 2q31.1 [CytoView hg38]
Mapping of homologs : NCBIMAP3K20-AS1 [Mapview hg19]  MAP3K20-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC040565
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MAP3K20-AS1
Cluster EST : UnigeneHs.570083 [ NCBI ]
CGAP (NCI)Hs.570083
Alternative Splicing GalleryENSG00000238133
Gene ExpressionMAP3K20-AS1 [ NCBI-GEO ]   MAP3K20-AS1 [ EBI - ARRAY_EXPRESS ]   MAP3K20-AS1 [ SEEK ]   MAP3K20-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)MAP3K20-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)339751
GTEX Portal (Tissue expression)MAP3K20-AS1
Human Protein AtlasENSG00000238133-MAP3K20-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MAP3K20-AS1
DMDM Disease mutations339751
Blocks (Seattle)MAP3K20-AS1
Human Protein Atlas [tissue]ENSG00000238133-MAP3K20-AS1 [tissue]
IPIIPI00743976   
Protein Interaction databases
FunCoupENSG00000238133
BioGRIDMAP3K20-AS1
STRING (EMBL)MAP3K20-AS1
ZODIACMAP3K20-AS1
Ontologies - Pathways
Huge Navigator MAP3K20-AS1 [HugePedia]
snp3D : Map Gene to Disease339751
BioCentury BCIQMAP3K20-AS1
ClinGenMAP3K20-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD339751
Clinical trialMAP3K20-AS1
Miscellaneous
canSAR (ICR)MAP3K20-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMAP3K20-AS1
EVEXMAP3K20-AS1
GoPubMedMAP3K20-AS1
iHOPMAP3K20-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:05:23 CET 2017

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