Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MAP3K7CL (MAP3K7 C-terminal like)

Identity

Alias_namesC21orf7
chromosome 21 open reading frame 7
Alias_symbol (synonym)TAKL
TAK1L
TAKL-1
TAKL-2
TAKL-4
Other aliasHC21ORF7
HGNC (Hugo) MAP3K7CL
LocusID (NCBI) 56911
Atlas_Id 68795
Location 21q21.3  [Link to chromosome band 21q21]
Location_base_pair Starts at 30449792 and ends at 30548210 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
BACH1 (21q21.3) / MAP3K7CL (21q21.3)SNAPC3 (9p22.3) / MAP3K7CL (21q21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MAP3K7CL   16457
Cards
Entrez_Gene (NCBI)MAP3K7CL  56911  MAP3K7 C-terminal like
AliasesC21orf7; HC21ORF7; TAK1L; TAKL; 
TAKL-1; TAKL-2; TAKL-4
GeneCards (Weizmann)MAP3K7CL
Ensembl hg19 (Hinxton)ENSG00000156265 [Gene_View]  chr21:30449792-30548210 [Contig_View]  MAP3K7CL [Vega]
Ensembl hg38 (Hinxton)ENSG00000156265 [Gene_View]  chr21:30449792-30548210 [Contig_View]  MAP3K7CL [Vega]
ICGC DataPortalENSG00000156265
TCGA cBioPortalMAP3K7CL
AceView (NCBI)MAP3K7CL
Genatlas (Paris)MAP3K7CL
WikiGenes56911
SOURCE (Princeton)MAP3K7CL
Genetics Home Reference (NIH)MAP3K7CL
Genomic and cartography
GoldenPath hg19 (UCSC)MAP3K7CL  -     chr21:30449792-30548210 +  21q21.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MAP3K7CL  -     21q21.3   [Description]    (hg38-Dec_2013)
EnsemblMAP3K7CL - 21q21.3 [CytoView hg19]  MAP3K7CL - 21q21.3 [CytoView hg38]
Mapping of homologs : NCBIMAP3K7CL [Mapview hg19]  MAP3K7CL [Mapview hg38]
OMIM611110   
Gene and transcription
Genbank (Entrez)AF269161 AF269162 AF269163 AF269164 AK056341
RefSeq transcript (Entrez)NM_001286617 NM_001286618 NM_001286619 NM_001286620 NM_001286622 NM_001286623 NM_001286624 NM_001286634 NM_020152
RefSeq genomic (Entrez)NC_000021 NC_018932 NT_011512 NW_004929426
Consensus coding sequences : CCDS (NCBI)MAP3K7CL
Cluster EST : UnigeneHs.222802 [ NCBI ]
CGAP (NCI)Hs.222802
Alternative Splicing GalleryENSG00000156265
Gene ExpressionMAP3K7CL [ NCBI-GEO ]   MAP3K7CL [ EBI - ARRAY_EXPRESS ]   MAP3K7CL [ SEEK ]   MAP3K7CL [ MEM ]
Gene Expression Viewer (FireBrowse)MAP3K7CL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56911
GTEX Portal (Tissue expression)MAP3K7CL
Protein : pattern, domain, 3D structure
UniProt/SwissProtP57077   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP57077  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP57077
Splice isoforms : SwissVarP57077
PhosPhoSitePlusP57077
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MAP3K7CL
DMDM Disease mutations56911
Blocks (Seattle)MAP3K7CL
SuperfamilyP57077
Human Protein AtlasENSG00000156265
Peptide AtlasP57077
HPRD10764
IPIIPI00025712   IPI00215845   IPI00215846   IPI00215847   IPI01008750   IPI00789680   
Protein Interaction databases
DIP (DOE-UCLA)P57077
IntAct (EBI)P57077
FunCoupENSG00000156265
BioGRIDMAP3K7CL
STRING (EMBL)MAP3K7CL
ZODIACMAP3K7CL
Ontologies - Pathways
QuickGOP57077
Ontology : AmiGOprotein binding  nucleus  cytosol  
Ontology : EGO-EBIprotein binding  nucleus  cytosol  
NDEx NetworkMAP3K7CL
Atlas of Cancer Signalling NetworkMAP3K7CL
Wikipedia pathwaysMAP3K7CL
Orthology - Evolution
OrthoDB56911
GeneTree (enSembl)ENSG00000156265
Phylogenetic Trees/Animal Genes : TreeFamMAP3K7CL
HOVERGENP57077
HOGENOMP57077
Homologs : HomoloGeneMAP3K7CL
Homology/Alignments : Family Browser (UCSC)MAP3K7CL
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMAP3K7CL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MAP3K7CL
dbVarMAP3K7CL
ClinVarMAP3K7CL
1000_GenomesMAP3K7CL 
Exome Variant ServerMAP3K7CL
ExAC (Exome Aggregation Consortium)MAP3K7CL (select the gene name)
Genetic variants : HAPMAP56911
Genomic Variants (DGV)MAP3K7CL [DGVbeta]
DECIPHER (Syndromes)21:30449792-30548210  ENSG00000156265
CONAN: Copy Number AnalysisMAP3K7CL 
Mutations
ICGC Data PortalMAP3K7CL 
TCGA Data PortalMAP3K7CL 
Broad Tumor PortalMAP3K7CL
OASIS PortalMAP3K7CL [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMAP3K7CL
BioMutasearch MAP3K7CL
DgiDB (Drug Gene Interaction Database)MAP3K7CL
DoCM (Curated mutations)MAP3K7CL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MAP3K7CL (select a term)
intoGenMAP3K7CL
Cancer3DMAP3K7CL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611110   
Orphanet
MedgenMAP3K7CL
Genetic Testing Registry MAP3K7CL
NextProtP57077 [Medical]
TSGene56911
GENETestsMAP3K7CL
Huge Navigator MAP3K7CL [HugePedia]
snp3D : Map Gene to Disease56911
BioCentury BCIQMAP3K7CL
ClinGenMAP3K7CL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD56911
Chemical/Pharm GKB GenePA25864
Clinical trialMAP3K7CL
Miscellaneous
canSAR (ICR)MAP3K7CL (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMAP3K7CL
EVEXMAP3K7CL
GoPubMedMAP3K7CL
iHOPMAP3K7CL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:27:40 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.