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MAP9 (microtubule associated protein 9)

Identity

Alias_symbol (synonym)ASAP
FLJ21159
Other alias
HGNC (Hugo) MAP9
LocusID (NCBI) 79884
Atlas_Id 56083
Location 4q32.1  [Link to chromosome band 4q32]
Location_base_pair Starts at 155342660 and ends at 155376970 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MAP9 (4q32.1) / CACNB2 (10p12.33)MAP9 (4q32.1) / TAT (16q22.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MAP9   26118
Cards
Entrez_Gene (NCBI)MAP9  79884  microtubule associated protein 9
AliasesASAP
GeneCards (Weizmann)MAP9
Ensembl hg19 (Hinxton)ENSG00000164114 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164114 [Gene_View]  chr4:155342660-155376970 [Contig_View]  MAP9 [Vega]
ICGC DataPortalENSG00000164114
TCGA cBioPortalMAP9
AceView (NCBI)MAP9
Genatlas (Paris)MAP9
WikiGenes79884
SOURCE (Princeton)MAP9
Genetics Home Reference (NIH)MAP9
Genomic and cartography
GoldenPath hg38 (UCSC)MAP9  -     chr4:155342660-155376970 -  4q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MAP9  -     4q32.1   [Description]    (hg19-Feb_2009)
EnsemblMAP9 - 4q32.1 [CytoView hg19]  MAP9 - 4q32.1 [CytoView hg38]
Mapping of homologs : NCBIMAP9 [Mapview hg19]  MAP9 [Mapview hg38]
OMIM610070   
Gene and transcription
Genbank (Entrez)AK024730 AK024812 AK301075 AY690636 BC022852
RefSeq transcript (Entrez)NM_001039580
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MAP9
Cluster EST : UnigeneHs.61271 [ NCBI ]
CGAP (NCI)Hs.61271
Alternative Splicing GalleryENSG00000164114
Gene ExpressionMAP9 [ NCBI-GEO ]   MAP9 [ EBI - ARRAY_EXPRESS ]   MAP9 [ SEEK ]   MAP9 [ MEM ]
Gene Expression Viewer (FireBrowse)MAP9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79884
GTEX Portal (Tissue expression)MAP9
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ49MG5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ49MG5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ49MG5
Splice isoforms : SwissVarQ49MG5
PhosPhoSitePlusQ49MG5
Domains : Interpro (EBI)MAP9   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MAP9
DMDM Disease mutations79884
Blocks (Seattle)MAP9
SuperfamilyQ49MG5
Human Protein AtlasENSG00000164114
Peptide AtlasQ49MG5
HPRD07957
IPIIPI00025323   IPI00783634   IPI00877608   IPI00952914   IPI00853101   IPI00448316   IPI00966024   IPI00965748   
Protein Interaction databases
DIP (DOE-UCLA)Q49MG5
IntAct (EBI)Q49MG5
FunCoupENSG00000164114
BioGRIDMAP9
STRING (EMBL)MAP9
ZODIACMAP9
Ontologies - Pathways
QuickGOQ49MG5
Ontology : AmiGOastral microtubule  cytokinesis  regulation of mitotic nuclear division  mitotic spindle assembly  mitotic spindle midzone  
Ontology : EGO-EBIastral microtubule  cytokinesis  regulation of mitotic nuclear division  mitotic spindle assembly  mitotic spindle midzone  
NDEx NetworkMAP9
Atlas of Cancer Signalling NetworkMAP9
Wikipedia pathwaysMAP9
Orthology - Evolution
OrthoDB79884
GeneTree (enSembl)ENSG00000164114
Phylogenetic Trees/Animal Genes : TreeFamMAP9
HOVERGENQ49MG5
HOGENOMQ49MG5
Homologs : HomoloGeneMAP9
Homology/Alignments : Family Browser (UCSC)MAP9
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMAP9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MAP9
dbVarMAP9
ClinVarMAP9
1000_GenomesMAP9 
Exome Variant ServerMAP9
ExAC (Exome Aggregation Consortium)MAP9 (select the gene name)
Genetic variants : HAPMAP79884
Genomic Variants (DGV)MAP9 [DGVbeta]
DECIPHERMAP9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMAP9 
Mutations
ICGC Data PortalMAP9 
TCGA Data PortalMAP9 
Broad Tumor PortalMAP9
OASIS PortalMAP9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMAP9  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMAP9
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MAP9
DgiDB (Drug Gene Interaction Database)MAP9
DoCM (Curated mutations)MAP9 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MAP9 (select a term)
intoGenMAP9
Cancer3DMAP9(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610070   
Orphanet
MedgenMAP9
Genetic Testing Registry MAP9
NextProtQ49MG5 [Medical]
TSGene79884
GENETestsMAP9
Target ValidationMAP9
Huge Navigator MAP9 [HugePedia]
snp3D : Map Gene to Disease79884
BioCentury BCIQMAP9
ClinGenMAP9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79884
Chemical/Pharm GKB GenePA145148442
Clinical trialMAP9
Miscellaneous
canSAR (ICR)MAP9 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMAP9
EVEXMAP9
GoPubMedMAP9
iHOPMAP9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:42:15 CEST 2017

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