Atlas of Genetics and Cytogenetics in Oncology and Haematology

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MAPK11 (mitogen-activated protein kinase 11)

Identity

Alias_namesPRKM11
Alias_symbol (synonym)p38-2
p38Beta
SAPK2
Other aliasP38B
P38BETA2
SAPK2B
HGNC (Hugo) MAPK11
LocusID (NCBI) 5600
Atlas_Id 41289
Location 22q13.33  [Link to chromosome band 22q13]
Location_base_pair Starts at 50263713 and ends at 50270393 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  dic(9;17)(p13;q11) PAX5/TAOK1

External links

Nomenclature
HGNC (Hugo)MAPK11   6873
Cards
Entrez_Gene (NCBI)MAPK11  5600  mitogen-activated protein kinase 11
AliasesP38B; P38BETA2; PRKM11; SAPK2; 
SAPK2B; p38-2; p38Beta
GeneCards (Weizmann)MAPK11
Ensembl hg19 (Hinxton)ENSG00000185386 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000185386 [Gene_View]  ENSG00000185386 [Sequence]  chr22:50263713-50270393 [Contig_View]  MAPK11 [Vega]
ICGC DataPortalENSG00000185386
TCGA cBioPortalMAPK11
AceView (NCBI)MAPK11
Genatlas (Paris)MAPK11
WikiGenes5600
SOURCE (Princeton)MAPK11
Genetics Home Reference (NIH)MAPK11
Genomic and cartography
GoldenPath hg38 (UCSC)MAPK11  -     chr22:50263713-50270393 -  22q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MAPK11  -     22q13.33   [Description]    (hg19-Feb_2009)
EnsemblMAPK11 - 22q13.33 [CytoView hg19]  MAPK11 - 22q13.33 [CytoView hg38]
Mapping of homologs : NCBIMAPK11 [Mapview hg19]  MAPK11 [Mapview hg38]
OMIM602898   
Gene and transcription
Genbank (Entrez)AF001008 AF001174 AF031135 AK291845 AK299745
RefSeq transcript (Entrez)NM_002751
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MAPK11
Cluster EST : UnigeneHs.57732 [ NCBI ]
CGAP (NCI)Hs.57732
Alternative Splicing GalleryENSG00000185386
Gene ExpressionMAPK11 [ NCBI-GEO ]   MAPK11 [ EBI - ARRAY_EXPRESS ]   MAPK11 [ SEEK ]   MAPK11 [ MEM ]
Gene Expression Viewer (FireBrowse)MAPK11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)5600
GTEX Portal (Tissue expression)MAPK11
Human Protein AtlasENSG00000185386-MAPK11 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ15759   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ15759  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ15759
Splice isoforms : SwissVarQ15759
Catalytic activity : Enzyme2.7.11.24 [ Enzyme-Expasy ]   2.7.11.242.7.11.24 [ IntEnz-EBI ]   2.7.11.24 [ BRENDA ]   2.7.11.24 [ KEGG ]   
PhosPhoSitePlusQ15759
Domaine pattern : Prosite (Expaxy)MAPK (PS01351)    PROTEIN_KINASE_ATP (PS00107)    PROTEIN_KINASE_DOM (PS50011)   
Domains : Interpro (EBI)Kinase-like_dom    MAP_kinase_CS    MAPK_p38    Prot_kinase_dom    Protein_kinase_ATP_BS   
Domain families : Pfam (Sanger)Pkinase (PF00069)   
Domain families : Pfam (NCBI)pfam00069   
Domain families : Smart (EMBL)S_TKc (SM00220)  
Conserved Domain (NCBI)MAPK11
DMDM Disease mutations5600
Blocks (Seattle)MAPK11
PDB (SRS)3GC8    3GC9    3GP0   
PDB (PDBSum)3GC8    3GC9    3GP0   
PDB (IMB)3GC8    3GC9    3GP0   
PDB (RSDB)3GC8    3GC9    3GP0   
Structural Biology KnowledgeBase3GC8    3GC9    3GP0   
SCOP (Structural Classification of Proteins)3GC8    3GC9    3GP0   
CATH (Classification of proteins structures)3GC8    3GC9    3GP0   
SuperfamilyQ15759
Human Protein Atlas [tissue]ENSG00000185386-MAPK11 [tissue]
Peptide AtlasQ15759
HPRD04208
IPIIPI00019473   IPI00922325   IPI00853117   
Protein Interaction databases
DIP (DOE-UCLA)Q15759
IntAct (EBI)Q15759
FunCoupENSG00000185386
BioGRIDMAPK11
STRING (EMBL)MAPK11
ZODIACMAPK11
Ontologies - Pathways
QuickGOQ15759
Ontology : AmiGOMAPK cascade  activation of MAPK activity  protein serine/threonine kinase activity  MAP kinase activity  protein binding  ATP binding  nucleus  nucleoplasm  cytoplasm  cytosol  transcription, DNA-templated  response to stress  signal transduction  Ras protein signal transduction  positive regulation of gene expression  intracellular signal transduction  positive regulation of erythrocyte differentiation  vascular endothelial growth factor receptor signaling pathway  regulation of DNA binding transcription factor activity  positive regulation of muscle cell differentiation  negative regulation of cardiac muscle cell proliferation  cellular response to virus  regulation of signal transduction by p53 class mediator  positive regulation of interleukin-12 secretion  
Ontology : EGO-EBIMAPK cascade  activation of MAPK activity  protein serine/threonine kinase activity  MAP kinase activity  protein binding  ATP binding  nucleus  nucleoplasm  cytoplasm  cytosol  transcription, DNA-templated  response to stress  signal transduction  Ras protein signal transduction  positive regulation of gene expression  intracellular signal transduction  positive regulation of erythrocyte differentiation  vascular endothelial growth factor receptor signaling pathway  regulation of DNA binding transcription factor activity  positive regulation of muscle cell differentiation  negative regulation of cardiac muscle cell proliferation  cellular response to virus  regulation of signal transduction by p53 class mediator  positive regulation of interleukin-12 secretion  
Pathways : BIOCARTAMAPKinase Signaling Pathway [Genes]    NFkB activation by Nontypeable Hemophilus influenzae [Genes]   
Pathways : KEGGLeukocyte transendothelial migration    MAPK signaling pathway    Epithelial cell signaling in Helicobacter pylori infection    GnRH signaling pathway    VEGF signaling pathway    Fc epsilon RI signaling pathway    Toll-like receptor signaling pathway   
NDEx NetworkMAPK11
Atlas of Cancer Signalling NetworkMAPK11
Wikipedia pathwaysMAPK11
Orthology - Evolution
OrthoDB5600
GeneTree (enSembl)ENSG00000185386
Phylogenetic Trees/Animal Genes : TreeFamMAPK11
HOVERGENQ15759
HOGENOMQ15759
Homologs : HomoloGeneMAPK11
Homology/Alignments : Family Browser (UCSC)MAPK11
Gene fusions - Rearrangements
Fusion : QuiverMAPK11
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMAPK11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MAPK11
dbVarMAPK11
ClinVarMAPK11
1000_GenomesMAPK11 
Exome Variant ServerMAPK11
ExAC (Exome Aggregation Consortium)ENSG00000185386
GNOMAD BrowserENSG00000185386
Genetic variants : HAPMAP5600
Genomic Variants (DGV)MAPK11 [DGVbeta]
DECIPHERMAPK11 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMAPK11 
Mutations
ICGC Data PortalMAPK11 
TCGA Data PortalMAPK11 
Broad Tumor PortalMAPK11
OASIS PortalMAPK11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMAPK11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMAPK11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MAPK11
DgiDB (Drug Gene Interaction Database)MAPK11
DoCM (Curated mutations)MAPK11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MAPK11 (select a term)
intoGenMAPK11
Cancer3DMAPK11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602898   
Orphanet
DisGeNETMAPK11
MedgenMAPK11
Genetic Testing Registry MAPK11
NextProtQ15759 [Medical]
TSGene5600
GENETestsMAPK11
Target ValidationMAPK11
Huge Navigator MAPK11 [HugePedia]
snp3D : Map Gene to Disease5600
BioCentury BCIQMAPK11
ClinGenMAPK11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD5600
Chemical/Pharm GKB GenePA30618
Clinical trialMAPK11
Miscellaneous
canSAR (ICR)MAPK11 (select the gene name)
Probes
Litterature
PubMed115 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMAPK11
EVEXMAPK11
GoPubMedMAPK11
iHOPMAPK11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 22 16:34:57 CEST 2018
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