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MAPRE3 (microtubule-associated protein, RP/EB family, member 3)

Identity

Other namesEB3
EBF3
EBF3-S
RP3
HGNC (Hugo) MAPRE3
LocusID (NCBI) 22924
Location 2p23.3
Location_base_pair Starts at 27193525 and ends at 27250087 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MAPRE3   6892
Cards
Entrez_Gene (NCBI)MAPRE3  22924  microtubule-associated protein, RP/EB family, member 3
GeneCards (Weizmann)MAPRE3
Ensembl (Hinxton)ENSG00000084764 [Gene_View]  chr2:27193525-27250087 [Contig_View]  MAPRE3 [Vega]
ICGC DataPortalENSG00000084764
cBioPortalMAPRE3
AceView (NCBI)MAPRE3
Genatlas (Paris)MAPRE3
WikiGenes22924
SOURCE (Princeton)NM_012326
Genomic and cartography
GoldenPath (UCSC)MAPRE3  -  2p23.3   chr2:27193525-27250087 +  2p23.3   [Description]    (hg19-Feb_2009)
EnsemblMAPRE3 - 2p23.3 [CytoView]
Mapping of homologs : NCBIMAPRE3 [Mapview]
OMIM605788   
Gene and transcription
Genbank (Entrez)AB025186 AK302950 AK312342 BC011557 CR536523
RefSeq transcript (Entrez)NM_012326
RefSeq genomic (Entrez)AC_000134 NC_000002 NC_018913 NT_022184 NW_001838768 NW_004929300
Consensus coding sequences : CCDS (NCBI)MAPRE3
Cluster EST : UnigeneHs.515860 [ NCBI ]
CGAP (NCI)Hs.515860
Alternative Splicing : Fast-db (Paris)GSHG0016320
Alternative Splicing GalleryENSG00000084764
Gene ExpressionMAPRE3 [ NCBI-GEO ]     MAPRE3 [ SEEK ]   MAPRE3 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UPY8 (Uniprot)
NextProtQ9UPY8  [Medical]
With graphics : InterProQ9UPY8
Splice isoforms : SwissVarQ9UPY8 (Swissvar)
Domaine pattern : Prosite (Expaxy)CH (PS50021)    EB1_C (PS51230)   
Domains : Interpro (EBI)CH-domain [organisation]   EB1_C [organisation]   EB3_vertebrate [organisation]   MAPRE [organisation]  
Related proteins : CluSTrQ9UPY8
Domain families : Pfam (Sanger)CH (PF00307)    EB1 (PF03271)   
Domain families : Pfam (NCBI)pfam00307    pfam03271   
DMDM Disease mutations22924
Blocks (Seattle)Q9UPY8
PDB (SRS)1WYO    3CO1    3TQ7   
PDB (PDBSum)1WYO    3CO1    3TQ7   
PDB (IMB)1WYO    3CO1    3TQ7   
PDB (RSDB)1WYO    3CO1    3TQ7   
Human Protein AtlasENSG00000084764 [gene] [tissue] [antibody] [cell] [cancer]
Peptide AtlasQ9UPY8
HPRD16156
IPIIPI00017597   IPI00553216   IPI00892961   
Protein Interaction databases
DIP (DOE-UCLA)Q9UPY8
IntAct (EBI)Q9UPY8
FunCoupENSG00000084764
BioGRIDMAPRE3
InParanoidQ9UPY8
Interologous Interaction database Q9UPY8
IntegromeDBMAPRE3
STRING (EMBL)MAPRE3
Ontologies - Pathways
Ontology : AmiGOprotein binding  cytoplasm  cytoplasm  microtubule  cytoplasmic microtubule  mitotic nuclear division  microtubule binding  microtubule cytoskeleton  midbody  positive regulation of cyclin-dependent protein serine/threonine kinase activity  positive regulation of transcription, DNA-templated  perinuclear region of cytoplasm  
Ontology : EGO-EBIprotein binding  cytoplasm  cytoplasm  microtubule  cytoplasmic microtubule  mitotic nuclear division  microtubule binding  microtubule cytoskeleton  midbody  positive regulation of cyclin-dependent protein serine/threonine kinase activity  positive regulation of transcription, DNA-templated  perinuclear region of cytoplasm  
Protein Interaction DatabaseMAPRE3
Wikipedia pathwaysMAPRE3
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)MAPRE3
snp3D : Map Gene to Disease22924
SNP (GeneSNP Utah)MAPRE3
SNP : HGBaseMAPRE3
Genetic variants : HAPMAPMAPRE3
Exome VariantMAPRE3
1000_GenomesMAPRE3 
ICGC programENSG00000084764 
Somatic Mutations in Cancer : COSMICMAPRE3 
CONAN: Copy Number AnalysisMAPRE3 
Mutations and Diseases : HGMDMAPRE3
Genomic VariantsMAPRE3  MAPRE3 [DGVbeta]
dbVarMAPRE3
ClinVarMAPRE3
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM605788   
MedgenMAPRE3
GENETestsMAPRE3
Disease Genetic AssociationMAPRE3
Huge Navigator MAPRE3 [HugePedia]  MAPRE3 [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneMAPRE3
Homology/Alignments : Family Browser (UCSC)MAPRE3
Phylogenetic Trees/Animal Genes : TreeFamMAPRE3
Chemical/Protein Interactions : CTD22924
Chemical/Pharm GKB GenePA30636
Clinical trialMAPRE3
Cancer Resource (Charite)ENSG00000084764
Other databases
Probes
Litterature
PubMed29 Pubmed reference(s) in Entrez
CoreMineMAPRE3
iHOPMAPRE3
OncoSearchMAPRE3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jul 30 14:04:16 CEST 2014

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