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MAPRE3 (microtubule-associated protein, RP/EB family, member 3)

Identity

Other namesEB3
EBF3
EBF3-S
RP3
HGNC (Hugo) MAPRE3
LocusID (NCBI) 22924
Location 2p23.3
Location_base_pair Starts at 27193525 and ends at 27250087 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MAPRE3   6892
Entrez_Gene (NCBI)MAPRE3  22924  microtubule-associated protein, RP/EB family, member 3
Cards
GeneCards (Weizmann)MAPRE3
Ensembl (Hinxton)ENSG00000084764 [Gene_View]  chr2:27193525-27250087 [Contig_View]  MAPRE3 [Vega]
AceView (NCBI)MAPRE3
Genatlas (Paris)MAPRE3
SOURCE (Stanford)NM_012326
Genomic and cartography
GoldenPath (UCSC)MAPRE3  -  2p23.3   chr2:27193525-27250087 +  2p23.3   [Description]    (hg19-Feb_2009)
EnsemblMAPRE3 - 2p23.3 [CytoView]
Mapping of homologs : NCBIMAPRE3 [Mapview]
OMIM605788   
Gene and transcription
Genbank (Entrez)AB025186 AK312342 BC011557 CR536523 CR541845
RefSeq transcript (SRS)NM_012326
RefSeq transcript (Entrez)NM_012326
RefSeq genomic (SRS)AC_000134 NC_000002 NC_018913 NT_022184 NW_001838768 NW_004078005
RefSeq genomic (Entrez)AC_000134 NC_000002 NC_018913 NT_022184 NW_001838768 NW_004078005
Consensus coding sequences : CCDS (NCBI)MAPRE3
Cluster EST : UnigeneHs.515860 [ SRS ] Hs.515860 [ NCBI ]
CGAP (NCI)Hs.515860
Alternative Splicing : Fast-db (Paris)GSHG0016320
Alternative Splicing GalleryENSG00000084764
Gene ExpressionMAPRE3 [ NCBI-GEO ]   MAPRE3 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UPY8 (SRS) Q9UPY8 (Uniprot)
NextProtQ9UPY8
With graphics : InterProQ9UPY8
Splice isoforms : SwissVarQ9UPY8(Swissvar)
Domaine pattern : Prosite (SRS)CH (PS50021)    EB1_C (PS51230)   
Domaine pattern : Prosite (Expaxy)CH (PS50021)    EB1_C (PS51230)   
Domains : Interpro (SRS)CH-domain    EB1_C    MAPRE   
Domains : Interpro (EBI)CH-domain    EB1_C    MAPRE   
Related proteins : CluSTrQ9UPY8
Domain families : Pfam (SRS)CH (PF00307)    EB1 (PF03271)   
Domain families : Pfam (Sanger)CH (PF00307)    EB1 (PF03271)   
Domain families : Pfam (NCBI)pfam00307    pfam03271   
DMDM22924
Blocks (Seattle)Q9UPY8
PDB (SRS)1WYO    3CO1    3TQ7   
PDB (PDBSum)1WYO    3CO1    3TQ7   
PDB (IMB)1WYO    3CO1    3TQ7   
PDB (RSDB)1WYO    3CO1    3TQ7   
Human Protein AtlasENSG00000084764
HPRD16156
IPIIPI00017597   IPI00553216   IPI00892961   
Protein Interaction databases
DIP (DOE-UCLA)Q9UPY8
IntAct (EBI)Q9UPY8
FunCoupENSG00000084764
REACTOMEMAPRE3
Protein Interaction Database22924
BioGRIDMAPRE3
InParanoidQ9UPY8
Interologous Interaction database Q9UPY8
IntegromeDBMAPRE3
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)MAPRE3
SNP (GeneSNP Utah)MAPRE3
SNP : HGBaseMAPRE3
Genetic variants : HAPMAPMAPRE3
Somatic Mutations in Cancer : COSMICMAPRE3 
CONAN: Copy Number AnalysisMAPRE3 
Mutations and Diseases : HGMDMAPRE3
OMIM605788   
GENETests605788   
Disease Genetic AssociationMAPRE3
Huge Navigator MAPRE3 [HugePedia]  MAPRE3 [HugeCancerGEM]
Genomic VariantsMAPRE3  MAPRE3 [DGVbeta]
ClinVarMAPRE3
snp3D : Map Gene to Disease22924
General knowledge
Homologs : HomoloGeneMAPRE3
Homology/Alignments : Family Browser (UCSC)MAPRE3
Phylogenetic Trees/Animal Genes : TreeFamMAPRE3
Chemical/Protein Interactions : CTD22924
Chemical/Pharm GKB GenePA30636
Clinical trialMAPRE3
Cancer Resource (Charite)ENSG00000084764
Ontology : AmiGOsmall GTPase regulator activity  protein binding  cytoplasm  cytoplasm  microtubule  cytoplasmic microtubule  cell cycle  mitosis  microtubule binding  midbody  positive regulation of transcription, DNA-dependent  perinuclear region of cytoplasm  cell division  
Ontology : EGO-EBIsmall GTPase regulator activity  protein binding  cytoplasm  cytoplasm  microtubule  cytoplasmic microtubule  cell cycle  mitosis  microtubule binding  midbody  positive regulation of transcription, DNA-dependent  perinuclear region of cytoplasm  cell division  
Other databases
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
PubGeneMAPRE3
iHOPMAPRE3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:25:48 CEST 2013
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