Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MARC1 (mitochondrial amidoxime reducing component 1)

Identity

Alias_namesMOSC1
MOCO sulphurase C-terminal domain containing 1
Alias_symbol (synonym)FLJ22390
Other alias
HGNC (Hugo) 1-Mar
LocusID (NCBI) 64757
Atlas_Id 68804
Location 1q41  [Link to chromosome band 1q41]
Location_base_pair Starts at 220786697 and ends at 220814399 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)1-Mar   26189
Cards
Entrez_Gene (NCBI)MARC1  64757  mitochondrial amidoxime reducing component 1
AliasesMOSC1
GeneCards (Weizmann)MARC1
Ensembl hg19 (Hinxton)ENSG00000186205 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186205 [Gene_View]  chr1:220786697-220814399 [Contig_View]  MARC1 [Vega]
ICGC DataPortalENSG00000186205
TCGA cBioPortalMARC1
AceView (NCBI)MARC1
Genatlas (Paris)MARC1
WikiGenes64757
SOURCE (Princeton)MARC1
Genetics Home Reference (NIH)MARC1
Genomic and cartography
GoldenPath hg38 (UCSC)MARC1  -     chr1:220786697-220814399 +  1q41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MARC1  -     1q41   [Description]    (hg19-Feb_2009)
EnsemblMARC1 - 1q41 [CytoView hg19]  MARC1 - 1q41 [CytoView hg38]
Mapping of homologs : NCBIMARC1 [Mapview hg19]  MARC1 [Mapview hg38]
OMIM614126   
Gene and transcription
Genbank (Entrez)AK000035 AK026043 AK092439 AK094105 AK225416
RefSeq transcript (Entrez)NM_022746
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MARC1
Cluster EST : UnigeneHs.497816 [ NCBI ]
CGAP (NCI)Hs.497816
Alternative Splicing GalleryENSG00000186205
Gene ExpressionMARC1 [ NCBI-GEO ]   MARC1 [ EBI - ARRAY_EXPRESS ]   MARC1 [ SEEK ]   MARC1 [ MEM ]
Gene Expression Viewer (FireBrowse)MARC1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64757
GTEX Portal (Tissue expression)MARC1
Human Protein AtlasENSG00000186205-MARC1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5VT66   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5VT66  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5VT66
Splice isoforms : SwissVarQ5VT66
Catalytic activity : Enzyme1.-.-.- [ Enzyme-Expasy ]   1.-.-.-1.-.-.- [ IntEnz-EBI ]   1.-.-.- [ BRENDA ]   1.-.-.- [ KEGG ]   
PhosPhoSitePlusQ5VT66
Domaine pattern : Prosite (Expaxy)MOSC (PS51340)   
Domains : Interpro (EBI)MoCF_Sase_C    MOSC_N    Pyrv_Knase-like_insert_dom   
Domain families : Pfam (Sanger)MOSC (PF03473)    MOSC_N (PF03476)   
Domain families : Pfam (NCBI)pfam03473    pfam03476   
Conserved Domain (NCBI)MARC1
DMDM Disease mutations64757
Blocks (Seattle)MARC1
SuperfamilyQ5VT66
Human Protein Atlas [tissue]ENSG00000186205-MARC1 [tissue]
Peptide AtlasQ5VT66
HPRD08653
IPIIPI00305258   IPI00828198   IPI00549307   IPI00843756   IPI00477711   
Protein Interaction databases
DIP (DOE-UCLA)Q5VT66
IntAct (EBI)Q5VT66
FunCoupENSG00000186205
BioGRIDMARC1
STRING (EMBL)MARC1
ZODIACMARC1
Ontologies - Pathways
QuickGOQ5VT66
Ontology : AmiGOmitochondrion  mitochondrion  mitochondrial outer membrane  mitochondrial inner membrane  xenobiotic metabolic process  nitrate reductase activity  integral component of membrane  molybdenum ion binding  pyridoxal phosphate binding  nitrate metabolic process  molybdopterin cofactor binding  detoxification of nitrogen compound  oxidation-reduction process  
Ontology : EGO-EBImitochondrion  mitochondrion  mitochondrial outer membrane  mitochondrial inner membrane  xenobiotic metabolic process  nitrate reductase activity  integral component of membrane  molybdenum ion binding  pyridoxal phosphate binding  nitrate metabolic process  molybdopterin cofactor binding  detoxification of nitrogen compound  oxidation-reduction process  
NDEx NetworkMARC1
Atlas of Cancer Signalling NetworkMARC1
Wikipedia pathwaysMARC1
Orthology - Evolution
OrthoDB64757
GeneTree (enSembl)ENSG00000186205
Phylogenetic Trees/Animal Genes : TreeFam1-Mar
HOVERGENQ5VT66
HOGENOMQ5VT66
Homologs : HomoloGeneMARC1
Homology/Alignments : Family Browser (UCSC)MARC1
Gene fusions - Rearrangements
Fusion: Tumor Portal MARC1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMARC1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MARC1
dbVarMARC1
ClinVarMARC1
1000_GenomesMARC1 
Exome Variant ServerMARC1
ExAC (Exome Aggregation Consortium)ENSG00000186205
GNOMAD BrowserENSG00000186205
Genetic variants : HAPMAP64757
Genomic Variants (DGV)MARC1 [DGVbeta]
DECIPHERMARC1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMARC1 
Mutations
ICGC Data Portal1-Mar 
TCGA Data Portal1-Mar 
Broad Tumor Portal1-Mar
OASIS Portal1-Mar [ Somatic mutations - Copy number]
Mutations and Diseases : HGMD1-Mar
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MARC1
DgiDB (Drug Gene Interaction Database)MARC1
DoCM (Curated mutations)MARC1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MARC1 (select a term)
intoGenMARC1
Cancer3DMARC1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614126   
Orphanet
MedgenMARC1
Genetic Testing Registry MARC1
NextProtQ5VT66 [Medical]
TSGene64757
GENETestsMARC1
Target ValidationMARC1
Huge Navigator 1-Mar [HugePedia]
snp3D : Map Gene to Disease64757
BioCentury BCIQMARC1
ClinGenMARC1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64757
Chemical/Pharm GKB GenePA142671344
Clinical trialMARC1
Miscellaneous
canSAR (ICR)MARC1 (select the gene name)
Probes
Litterature
PubMed29 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMARC1
EVEXMARC1
GoPubMedMARC1
iHOPMARC1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:12:14 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.