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MARCH11 (membrane associated ring-CH-type finger 11)

Identity

Alias_namesmembrane-associated ring finger (C3HC4) 11
Alias_symbol (synonym)MARCH-XI
Other alias
HGNC (Hugo) 11-Mar
LocusID (NCBI) 441061
Atlas_Id 68808
Location 5p15.1  [Link to chromosome band 5p15]
Location_base_pair Starts at 16067365 and ends at 16179788 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CLINT1 (5q33.3) / MARCH11 (5p15.1)ICE1 (5p15.32) / MARCH11 (5p15.1)TRIO (5p15.2) / MARCH11 (5p15.1)
TRIO MARCH11CLINT1 MARCH11

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)11-Mar   33609
Cards
Entrez_Gene (NCBI)MARCH11  441061  membrane associated ring-CH-type finger 11
AliasesMARCH-XI
GeneCards (Weizmann)MARCH11
Ensembl hg19 (Hinxton)ENSG00000183654 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183654 [Gene_View]  chr5:16067365-16179788 [Contig_View]  MARCH11 [Vega]
ICGC DataPortalENSG00000183654
TCGA cBioPortalMARCH11
AceView (NCBI)MARCH11
Genatlas (Paris)MARCH11
WikiGenes441061
SOURCE (Princeton)MARCH11
Genetics Home Reference (NIH)MARCH11
Genomic and cartography
GoldenPath hg38 (UCSC)MARCH11  -     chr5:16067365-16179788 -  5p15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MARCH11  -     5p15.1   [Description]    (hg19-Feb_2009)
EnsemblMARCH11 - 5p15.1 [CytoView hg19]  MARCH11 - 5p15.1 [CytoView hg38]
Mapping of homologs : NCBIMARCH11 [Mapview hg19]  MARCH11 [Mapview hg38]
OMIM613338   
Gene and transcription
Genbank (Entrez)BC150513 BC150514 DB455291
RefSeq transcript (Entrez)NM_001102562
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MARCH11
Cluster EST : UnigeneHs.662216 [ NCBI ]
CGAP (NCI)Hs.662216
Alternative Splicing GalleryENSG00000183654
Gene ExpressionMARCH11 [ NCBI-GEO ]   MARCH11 [ EBI - ARRAY_EXPRESS ]   MARCH11 [ SEEK ]   MARCH11 [ MEM ]
Gene Expression Viewer (FireBrowse)MARCH11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)441061
GTEX Portal (Tissue expression)MARCH11
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NNE9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NNE9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NNE9
Splice isoforms : SwissVarA6NNE9
Catalytic activity : Enzyme2.3.2.27 [ Enzyme-Expasy ]   2.3.2.272.3.2.27 [ IntEnz-EBI ]   2.3.2.27 [ BRENDA ]   2.3.2.27 [ KEGG ]   
PhosPhoSitePlusA6NNE9
Domaine pattern : Prosite (Expaxy)ZF_RING_CH (PS51292)   
Domains : Interpro (EBI)MARCH-like    Znf_RING-CH    Znf_RING/FYVE/PHD   
Domain families : Pfam (Sanger)RINGv (PF12906)   
Domain families : Pfam (NCBI)pfam12906   
Domain families : Smart (EMBL)RINGv (SM00744)  
Conserved Domain (NCBI)MARCH11
DMDM Disease mutations441061
Blocks (Seattle)MARCH11
SuperfamilyA6NNE9
Human Protein AtlasENSG00000183654
Peptide AtlasA6NNE9
IPIIPI00855850   IPI00895796   IPI00965065   
Protein Interaction databases
DIP (DOE-UCLA)A6NNE9
IntAct (EBI)A6NNE9
FunCoupENSG00000183654
BioGRIDMARCH11
STRING (EMBL)MARCH11
ZODIACMARCH11
Ontologies - Pathways
QuickGOA6NNE9
Ontology : AmiGOzinc ion binding  integral component of membrane  protein ubiquitination  transferase activity  cytoplasmic vesicle membrane  
Ontology : EGO-EBIzinc ion binding  integral component of membrane  protein ubiquitination  transferase activity  cytoplasmic vesicle membrane  
NDEx NetworkMARCH11
Atlas of Cancer Signalling NetworkMARCH11
Wikipedia pathwaysMARCH11
Orthology - Evolution
OrthoDB441061
GeneTree (enSembl)ENSG00000183654
Phylogenetic Trees/Animal Genes : TreeFam11-Mar
HOVERGENA6NNE9
HOGENOMA6NNE9
Homologs : HomoloGeneMARCH11
Homology/Alignments : Family Browser (UCSC)MARCH11
Gene fusions - Rearrangements
Fusion: TCGATRIO MARCH11
Fusion: TCGACLINT1 MARCH11
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMARCH11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MARCH11
dbVarMARCH11
ClinVarMARCH11
1000_GenomesMARCH11 
Exome Variant ServerMARCH11
ExAC (Exome Aggregation Consortium)MARCH11 (select the gene name)
Genetic variants : HAPMAP441061
Genomic Variants (DGV)MARCH11 [DGVbeta]
DECIPHERMARCH11 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMARCH11 
Mutations
ICGC Data Portal11-Mar 
TCGA Data Portal11-Mar 
Broad Tumor Portal11-Mar
OASIS Portal11-Mar [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMARCH11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMD11-Mar
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MARCH11
DgiDB (Drug Gene Interaction Database)MARCH11
DoCM (Curated mutations)MARCH11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MARCH11 (select a term)
intoGenMARCH11
Cancer3DMARCH11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613338   
Orphanet
MedgenMARCH11
Genetic Testing Registry MARCH11
NextProtA6NNE9 [Medical]
TSGene441061
GENETestsMARCH11
Target ValidationMARCH11
Huge Navigator 11-Mar [HugePedia]
snp3D : Map Gene to Disease441061
BioCentury BCIQMARCH11
ClinGenMARCH11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD441061
Chemical/Pharm GKB GenePA162395055
Clinical trialMARCH11
Miscellaneous
canSAR (ICR)MARCH11 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMARCH11
EVEXMARCH11
GoPubMedMARCH11
iHOPMARCH11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:25:32 CEST 2017

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