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MARVELD1 (MARVEL domain containing 1)

Identity

Alias_namesMRVLDC1
MARVEL (membrane-associating) domain containing 1
Alias_symbol (synonym)MGC4415
GB14
FLJ23440
FLJ22343
bA548K23.8
Other aliasMARVD1
HGNC (Hugo) MARVELD1
LocusID (NCBI) 83742
Atlas_Id 51121
Location 10q24.2  [Link to chromosome band 10q24]
Location_base_pair Starts at 97713708 and ends at 97718152 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MARVELD1   28674
Cards
Entrez_Gene (NCBI)MARVELD1  83742  MARVEL domain containing 1
AliasesGB14; MARVD1; MRVLDC1; bA548K23.8
GeneCards (Weizmann)MARVELD1
Ensembl hg19 (Hinxton)ENSG00000155254 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000155254 [Gene_View]  chr10:97713708-97718152 [Contig_View]  MARVELD1 [Vega]
ICGC DataPortalENSG00000155254
TCGA cBioPortalMARVELD1
AceView (NCBI)MARVELD1
Genatlas (Paris)MARVELD1
WikiGenes83742
SOURCE (Princeton)MARVELD1
Genetics Home Reference (NIH)MARVELD1
Genomic and cartography
GoldenPath hg38 (UCSC)MARVELD1  -     chr10:97713708-97718152 +  10q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MARVELD1  -     10q24.2   [Description]    (hg19-Feb_2009)
EnsemblMARVELD1 - 10q24.2 [CytoView hg19]  MARVELD1 - 10q24.2 [CytoView hg38]
Mapping of homologs : NCBIMARVELD1 [Mapview hg19]  MARVELD1 [Mapview hg38]
OMIM616970   
Gene and transcription
Genbank (Entrez)AF325259 AI347102 AK025996 AK027093 BC004995
RefSeq transcript (Entrez)NM_031484
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MARVELD1
Cluster EST : UnigeneHs.744073 [ NCBI ]
CGAP (NCI)Hs.744073
Alternative Splicing GalleryENSG00000155254
Gene ExpressionMARVELD1 [ NCBI-GEO ]   MARVELD1 [ EBI - ARRAY_EXPRESS ]   MARVELD1 [ SEEK ]   MARVELD1 [ MEM ]
Gene Expression Viewer (FireBrowse)MARVELD1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)83742
GTEX Portal (Tissue expression)MARVELD1
Human Protein AtlasENSG00000155254-MARVELD1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BSK0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BSK0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BSK0
Splice isoforms : SwissVarQ9BSK0
PhosPhoSitePlusQ9BSK0
Domaine pattern : Prosite (Expaxy)MARVEL (PS51225)   
Domains : Interpro (EBI)Marvel   
Domain families : Pfam (Sanger)MARVEL (PF01284)   
Domain families : Pfam (NCBI)pfam01284   
Conserved Domain (NCBI)MARVELD1
DMDM Disease mutations83742
Blocks (Seattle)MARVELD1
SuperfamilyQ9BSK0
Human Protein Atlas [tissue]ENSG00000155254-MARVELD1 [tissue]
Peptide AtlasQ9BSK0
HPRD14364
IPIIPI00027830   
Protein Interaction databases
DIP (DOE-UCLA)Q9BSK0
IntAct (EBI)Q9BSK0
FunCoupENSG00000155254
BioGRIDMARVELD1
STRING (EMBL)MARVELD1
ZODIACMARVELD1
Ontologies - Pathways
QuickGOQ9BSK0
Ontology : AmiGOmembrane raft polarization  nucleus  cytoplasm  cytoskeleton  plasma membrane  cell cycle  protein localization  integral component of membrane  structural constituent of myelin sheath  myelination  membrane raft  
Ontology : EGO-EBImembrane raft polarization  nucleus  cytoplasm  cytoskeleton  plasma membrane  cell cycle  protein localization  integral component of membrane  structural constituent of myelin sheath  myelination  membrane raft  
NDEx NetworkMARVELD1
Atlas of Cancer Signalling NetworkMARVELD1
Wikipedia pathwaysMARVELD1
Orthology - Evolution
OrthoDB83742
GeneTree (enSembl)ENSG00000155254
Phylogenetic Trees/Animal Genes : TreeFamMARVELD1
HOVERGENQ9BSK0
HOGENOMQ9BSK0
Homologs : HomoloGeneMARVELD1
Homology/Alignments : Family Browser (UCSC)MARVELD1
Gene fusions - Rearrangements
Tumor Fusion PortalMARVELD1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMARVELD1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MARVELD1
dbVarMARVELD1
ClinVarMARVELD1
1000_GenomesMARVELD1 
Exome Variant ServerMARVELD1
ExAC (Exome Aggregation Consortium)ENSG00000155254
GNOMAD BrowserENSG00000155254
Genetic variants : HAPMAP83742
Genomic Variants (DGV)MARVELD1 [DGVbeta]
DECIPHERMARVELD1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMARVELD1 
Mutations
ICGC Data PortalMARVELD1 
TCGA Data PortalMARVELD1 
Broad Tumor PortalMARVELD1
OASIS PortalMARVELD1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMARVELD1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMARVELD1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MARVELD1
DgiDB (Drug Gene Interaction Database)MARVELD1
DoCM (Curated mutations)MARVELD1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MARVELD1 (select a term)
intoGenMARVELD1
Cancer3DMARVELD1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616970   
Orphanet
DisGeNETMARVELD1
MedgenMARVELD1
Genetic Testing Registry MARVELD1
NextProtQ9BSK0 [Medical]
TSGene83742
GENETestsMARVELD1
Target ValidationMARVELD1
Huge Navigator MARVELD1 [HugePedia]
snp3D : Map Gene to Disease83742
BioCentury BCIQMARVELD1
ClinGenMARVELD1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD83742
Chemical/Pharm GKB GenePA134937190
Clinical trialMARVELD1
Miscellaneous
canSAR (ICR)MARVELD1 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMARVELD1
EVEXMARVELD1
GoPubMedMARVELD1
iHOPMARVELD1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:21:44 CET 2017

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