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MARVELD3 (MARVEL domain containing 3)

Identity

Alias_namesMRVLDC3
MARVEL (membrane-associating) domain containing 3
Other aliasMARVD3
HGNC (Hugo) MARVELD3
LocusID (NCBI) 91862
Atlas_Id 52542
Location 16q22.2  [Link to chromosome band 16q22]
Location_base_pair Starts at 71626153 and ends at 71641965 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MARVELD3   30525
Cards
Entrez_Gene (NCBI)MARVELD3  91862  MARVEL domain containing 3
AliasesMARVD3; MRVLDC3
GeneCards (Weizmann)MARVELD3
Ensembl hg19 (Hinxton)ENSG00000140832 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000140832 [Gene_View]  chr16:71626153-71641965 [Contig_View]  MARVELD3 [Vega]
ICGC DataPortalENSG00000140832
TCGA cBioPortalMARVELD3
AceView (NCBI)MARVELD3
Genatlas (Paris)MARVELD3
WikiGenes91862
SOURCE (Princeton)MARVELD3
Genetics Home Reference (NIH)MARVELD3
Genomic and cartography
GoldenPath hg38 (UCSC)MARVELD3  -     chr16:71626153-71641965 +  16q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MARVELD3  -     16q22.2   [Description]    (hg19-Feb_2009)
EnsemblMARVELD3 - 16q22.2 [CytoView hg19]  MARVELD3 - 16q22.2 [CytoView hg38]
Mapping of homologs : NCBIMARVELD3 [Mapview hg19]  MARVELD3 [Mapview hg38]
OMIM614094   
Gene and transcription
Genbank (Entrez)AA568498 AI420156 AK056842 AK292185 AK307585
RefSeq transcript (Entrez)NM_001017967 NM_001271329 NM_052858
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MARVELD3
Cluster EST : UnigeneHs.513706 [ NCBI ]
CGAP (NCI)Hs.513706
Alternative Splicing GalleryENSG00000140832
Gene ExpressionMARVELD3 [ NCBI-GEO ]   MARVELD3 [ EBI - ARRAY_EXPRESS ]   MARVELD3 [ SEEK ]   MARVELD3 [ MEM ]
Gene Expression Viewer (FireBrowse)MARVELD3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)91862
GTEX Portal (Tissue expression)MARVELD3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96A59   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96A59  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96A59
Splice isoforms : SwissVarQ96A59
PhosPhoSitePlusQ96A59
Domaine pattern : Prosite (Expaxy)MARVEL (PS51225)   
Domains : Interpro (EBI)Marvel   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MARVELD3
DMDM Disease mutations91862
Blocks (Seattle)MARVELD3
SuperfamilyQ96A59
Human Protein AtlasENSG00000140832
Peptide AtlasQ96A59
HPRD14365
IPIIPI00059270   IPI00307791   IPI00386682   
Protein Interaction databases
DIP (DOE-UCLA)Q96A59
IntAct (EBI)Q96A59
FunCoupENSG00000140832
BioGRIDMARVELD3
STRING (EMBL)MARVELD3
ZODIACMARVELD3
Ontologies - Pathways
QuickGOQ96A59
Ontology : AmiGOprotein binding  bicellular tight junction  response to osmotic stress  negative regulation of epithelial cell migration  integral component of membrane  cytoplasmic vesicle  mitogen-activated protein kinase kinase kinase binding  cell-cell junction organization  negative regulation of JNK cascade  negative regulation of epithelial cell proliferation  bicellular tight junction assembly  protein localization to cell junction  
Ontology : EGO-EBIprotein binding  bicellular tight junction  response to osmotic stress  negative regulation of epithelial cell migration  integral component of membrane  cytoplasmic vesicle  mitogen-activated protein kinase kinase kinase binding  cell-cell junction organization  negative regulation of JNK cascade  negative regulation of epithelial cell proliferation  bicellular tight junction assembly  protein localization to cell junction  
NDEx NetworkMARVELD3
Atlas of Cancer Signalling NetworkMARVELD3
Wikipedia pathwaysMARVELD3
Orthology - Evolution
OrthoDB91862
GeneTree (enSembl)ENSG00000140832
Phylogenetic Trees/Animal Genes : TreeFamMARVELD3
HOVERGENQ96A59
HOGENOMQ96A59
Homologs : HomoloGeneMARVELD3
Homology/Alignments : Family Browser (UCSC)MARVELD3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMARVELD3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MARVELD3
dbVarMARVELD3
ClinVarMARVELD3
1000_GenomesMARVELD3 
Exome Variant ServerMARVELD3
ExAC (Exome Aggregation Consortium)MARVELD3 (select the gene name)
Genetic variants : HAPMAP91862
Genomic Variants (DGV)MARVELD3 [DGVbeta]
DECIPHERMARVELD3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMARVELD3 
Mutations
ICGC Data PortalMARVELD3 
TCGA Data PortalMARVELD3 
Broad Tumor PortalMARVELD3
OASIS PortalMARVELD3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMARVELD3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMARVELD3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MARVELD3
DgiDB (Drug Gene Interaction Database)MARVELD3
DoCM (Curated mutations)MARVELD3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MARVELD3 (select a term)
intoGenMARVELD3
Cancer3DMARVELD3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614094   
Orphanet
MedgenMARVELD3
Genetic Testing Registry MARVELD3
NextProtQ96A59 [Medical]
TSGene91862
GENETestsMARVELD3
Target ValidationMARVELD3
Huge Navigator MARVELD3 [HugePedia]
snp3D : Map Gene to Disease91862
BioCentury BCIQMARVELD3
ClinGenMARVELD3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD91862
Chemical/Pharm GKB GenePA134986126
Clinical trialMARVELD3
Miscellaneous
canSAR (ICR)MARVELD3 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMARVELD3
EVEXMARVELD3
GoPubMedMARVELD3
iHOPMARVELD3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:42:22 CEST 2017

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