Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MAT2B (methionine adenosyltransferase 2B)

Identity

Alias (NCBI)MAT-II
MATIIbeta
Nbla02999
SDR23E1
TGR
HGNC (Hugo) MAT2B
HGNC Alias symbMATIIbeta
SDR23E1
HGNC Alias nameshort chain dehydrogenase/reductase family 23E, member 1
HGNC Previous namemethionine adenosyltransferase II, beta
LocusID (NCBI) 27430
Atlas_Id 50028
Location 5q34  [Link to chromosome band 5q34]
Location_base_pair Starts at 163503064 and ends at 163519353 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MAT2B (5q34) / HMMR (5q34)S100A13 (1q21.3) / MAT2B (5q34)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MAT2B   6905
Cards
Entrez_Gene (NCBI)MAT2B    methionine adenosyltransferase 2B
AliasesMAT-II; MATIIbeta; Nbla02999; SDR23E1; 
TGR
GeneCards (Weizmann)MAT2B
Ensembl hg19 (Hinxton)ENSG00000038274 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000038274 [Gene_View]  ENSG00000038274 [Sequence]  chr5:163503064-163519353 [Contig_View]  MAT2B [Vega]
ICGC DataPortalENSG00000038274
TCGA cBioPortalMAT2B
AceView (NCBI)MAT2B
Genatlas (Paris)MAT2B
SOURCE (Princeton)MAT2B
Genetics Home Reference (NIH)MAT2B
Genomic and cartography
GoldenPath hg38 (UCSC)MAT2B  -     chr5:163503064-163519353 +  5q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MAT2B  -     5q34   [Description]    (hg19-Feb_2009)
GoldenPathMAT2B - 5q34 [CytoView hg19]  MAT2B - 5q34 [CytoView hg38]
ImmunoBaseENSG00000038274
Genome Data Viewer NCBIMAT2B [Mapview hg19]  
OMIM605527   
Gene and transcription
Genbank (Entrez)AB073390 AF113225 AF182814 AJ243721 AK096178
RefSeq transcript (Entrez)NM_013283 NM_182796
Consensus coding sequences : CCDS (NCBI)MAT2B
Gene ExpressionMAT2B [ NCBI-GEO ]   MAT2B [ EBI - ARRAY_EXPRESS ]   MAT2B [ SEEK ]   MAT2B [ MEM ]
Gene Expression Viewer (FireBrowse)MAT2B [ Firebrowse - Broad ]
GenevisibleExpression of MAT2B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)27430
GTEX Portal (Tissue expression)MAT2B
Human Protein AtlasENSG00000038274-MAT2B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MAT2B
Human Protein Atlas [tissue]ENSG00000038274-MAT2B [tissue]
HPRD05701
Protein Interaction databases
BioGRIDMAT2B
STRING (EMBL)MAT2B
ZODIACMAT2B
Ontologies - Pathways
Litterature
PubMed74 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMAT2B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:17:56 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.