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MATN1-AS1 (MATN1 antisense RNA 1)

Identity

Alias_namesMATN1 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) MATN1-AS1
LocusID (NCBI) 100129196
Atlas_Id 68819
Location 1p35.2  [Link to chromosome band 1p35]
Location_base_pair Starts at 30718772 and ends at 30726746 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MATN1-AS1   40364
Cards
Entrez_Gene (NCBI)MATN1-AS1  100129196  MATN1 antisense RNA 1
Aliases
GeneCards (Weizmann)MATN1-AS1
Ensembl hg19 (Hinxton)ENSG00000186056 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186056 [Gene_View]  chr1:30718772-30726746 [Contig_View]  MATN1-AS1 [Vega]
ICGC DataPortalENSG00000186056
TCGA cBioPortalMATN1-AS1
AceView (NCBI)MATN1-AS1
Genatlas (Paris)MATN1-AS1
WikiGenes100129196
SOURCE (Princeton)MATN1-AS1
Genetics Home Reference (NIH)MATN1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)MATN1-AS1  -     chr1:30718772-30726746 +  1p35.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MATN1-AS1  -     1p35.2   [Description]    (hg19-Feb_2009)
EnsemblMATN1-AS1 - 1p35.2 [CytoView hg19]  MATN1-AS1 - 1p35.2 [CytoView hg38]
Mapping of homologs : NCBIMATN1-AS1 [Mapview hg19]  MATN1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057725 AK128076 BC044253
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MATN1-AS1
Cluster EST : UnigeneHs.659751 [ NCBI ]
CGAP (NCI)Hs.659751
Alternative Splicing GalleryENSG00000186056
Gene ExpressionMATN1-AS1 [ NCBI-GEO ]   MATN1-AS1 [ EBI - ARRAY_EXPRESS ]   MATN1-AS1 [ SEEK ]   MATN1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)MATN1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100129196
GTEX Portal (Tissue expression)MATN1-AS1
Human Protein AtlasENSG00000186056-MATN1-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MATN1-AS1
DMDM Disease mutations100129196
Blocks (Seattle)MATN1-AS1
Human Protein Atlas [tissue]ENSG00000186056-MATN1-AS1 [tissue]
IPIIPI00743789   IPI00443973   
Protein Interaction databases
FunCoupENSG00000186056
BioGRIDMATN1-AS1
STRING (EMBL)MATN1-AS1
ZODIACMATN1-AS1
Ontologies - Pathways
Huge Navigator MATN1-AS1 [HugePedia]
snp3D : Map Gene to Disease100129196
BioCentury BCIQMATN1-AS1
ClinGenMATN1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100129196
Clinical trialMATN1-AS1
Miscellaneous
canSAR (ICR)MATN1-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMATN1-AS1
EVEXMATN1-AS1
GoPubMedMATN1-AS1
iHOPMATN1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:23 CET 2017

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