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MATN2 (matrilin 2)

Identity

Alias (NCBI)-
HGNC (Hugo) MATN2
LocusID (NCBI) 4147
Atlas_Id 50840
Location 8q22.1  [Link to chromosome band 8q22]
Location_base_pair Starts at 97869064 and ends at 98036723 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
HDAC2 (6q21) / MATN2 (8q22.1)KCTD12 (13q22.3) / MATN2 (8q22.1)MATN2 (8q22.1) / PLEKHA7 (11p15.1)
POP1 (8q22.2) / MATN2 (8q22.1)RAD54B (8q22.1) / MATN2 (8q22.1)ZNF461 (19q13.12) / MATN2 (8q22.1)
RAD54B 8q22.1 / MATN2 8q22.1ZNF461 19q13.12 / MATN2 8q22.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MATN2   6908
Cards
Entrez_Gene (NCBI)MATN2    matrilin 2
Aliases
GeneCards (Weizmann)MATN2
Ensembl hg19 (Hinxton)ENSG00000132561 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000132561 [Gene_View]  ENSG00000132561 [Sequence]  chr8:97869064-98036723 [Contig_View]  MATN2 [Vega]
ICGC DataPortalENSG00000132561
TCGA cBioPortalMATN2
AceView (NCBI)MATN2
Genatlas (Paris)MATN2
SOURCE (Princeton)MATN2
Genetics Home Reference (NIH)MATN2
Genomic and cartography
GoldenPath hg38 (UCSC)MATN2  -     chr8:97869064-98036723 +  8q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MATN2  -     8q22.1   [Description]    (hg19-Feb_2009)
GoldenPathMATN2 - 8q22.1 [CytoView hg19]  MATN2 - 8q22.1 [CytoView hg38]
ImmunoBaseENSG00000132561
Genome Data Viewer NCBIMATN2 [Mapview hg19]  
OMIM602108   
Gene and transcription
Genbank (Entrez)AI434413 AK027775 AK075489 AK094101 AK289721
RefSeq transcript (Entrez)NM_001317748 NM_002380 NM_030583
Consensus coding sequences : CCDS (NCBI)MATN2
Gene ExpressionMATN2 [ NCBI-GEO ]   MATN2 [ EBI - ARRAY_EXPRESS ]   MATN2 [ SEEK ]   MATN2 [ MEM ]
Gene Expression Viewer (FireBrowse)MATN2 [ Firebrowse - Broad ]
GenevisibleExpression of MATN2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4147
GTEX Portal (Tissue expression)MATN2
Human Protein AtlasENSG00000132561-MATN2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MATN2
Human Protein Atlas [tissue]ENSG00000132561-MATN2 [tissue]
HPRD03660
Protein Interaction databases
BioGRIDMATN2
STRING (EMBL)MATN2
ZODIACMATN2
Ontologies - Pathways
Litterature
PubMed43 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMATN2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:17:57 CEST 2021

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