MC1R (melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor))

Identity

Other names	MGC14337
	MSH-R
	SHEP2
HGNC	MC1R
Location	16q24.3
Location_base_pair	Starts at 88511788 and ends at 88514886 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	MC1R   6929
Entrez_Gene	MC1R  4157  melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)
	Cards
GeneCards	MC1R
Ensembl	MC1R [Search_View]   ENSG00000197971 [Gene_View]
Genatlas	MC1R
GeneLynx	MC1R
eGenome	MC1R
euGene	4157
	Genomic and cartography
GoldenPath	MC1R  -  16q24.3   chr16:88511788-88514886 +  16q24.3   [Description]    (hg18-March_2006)
Ensembl	MC1R - 16q24.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	MC1R
	Gene and transcription
Genbank	AK024232 [ ENTREZ ]
Genbank	AK054666 [ ENTREZ ]
Genbank	AK225902 [ ENTREZ ]
Genbank	BC007856 [ ENTREZ ]
Genbank	BC080622 [ ENTREZ ]
RefSeq	NM_002386 [ SRS ]    NM_002386 [ ENTREZ ]
RefSeq	AC_000059 [ SRS ]    AC_000059 [ ENTREZ ]
RefSeq	AC_000148 [ SRS ]    AC_000148 [ ENTREZ ]
RefSeq	NC_000016 [ SRS ]    NC_000016 [ ENTREZ ]
RefSeq	NT_010542 [ SRS ]    NT_010542 [ ENTREZ ]
RefSeq	NW_001838336 [ SRS ]    NW_001838336 [ ENTREZ ]
RefSeq	NW_926561 [ SRS ]    NW_926561 [ ENTREZ ]
AceView	MC1R AceView - NCBI
Unigene	Hs.513829 [ SRS ]    Hs.513829 [ NCBI ]     HS513829 [ spliceNest ]
Fast-db	12706 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q01726 [ SRS]    Q01726 [ EXPASY ]     Q01726 [ INTERPRO ]     Q01726 [ UNIPROT ]
Prosite	PS00237 G_PROTEIN_RECEP_F1_1 [ SRS ]    PS00237 G_PROTEIN_RECEP_F1_1 [ Expasy ]
Prosite	PS50262 G_PROTEIN_RECEP_F1_2 [ SRS ]    PS50262 G_PROTEIN_RECEP_F1_2 [ Expasy ]
Interpro	IPR000276 GPCR_Rhodpsn [ SRS ]    IPR000276 GPCR_Rhodpsn [ EBI ]
Interpro	IPR017452 GPCR_Rhodpsn_supfam [ SRS ]    IPR017452 GPCR_Rhodpsn_supfam [ EBI ]
Interpro	IPR001671 Melcrt_ACTH_rcpt [ SRS ]    IPR001671 Melcrt_ACTH_rcpt [ EBI ]
Interpro	IPR000761 MSH_rcpt [ SRS ]    IPR000761 MSH_rcpt [ EBI ]
CluSTr	Q01726
Pfam	PF00001 7tm_1 [ SRS ]    PF00001 7tm_1 [ Sanger ]    pfam00001 [ NCBI-CDD ]
Blocks	Q01726
HPRD	01118
	Protein Interaction databases
DIP	Q01726
IntAct	Q01726
	Polymorphism : SNP, mutations, diseases
OMIM	155555;155600;203200;226300;266300    [ map ]
GENECLINICS	155555;155600;203200;226300;266300
SNP	MC1R [dbSNP-NCBI]
SNP	NM_002386 [SNP-NCI]
SNP	MC1R [GeneSNPs - Utah]  MC1R] [HGBASE - SRS]
HAPMAP	MC1R [HAPMAP]
HGMD	MC1R
	General knowledge
Family Browser	MC1R [UCSC Family Browser]
SOURCE	NM_002386
SMD	Hs.513829
SAGE	Hs.513829
GO	rhodopsin-like receptor activity [Amigo]  rhodopsin-like receptor activity
GO	receptor activity [Amigo]  receptor activity
GO	melanocyte stimulating hormone receptor activity [Amigo]  melanocyte stimulating hormone receptor activity
GO	plasma membrane [Amigo]  plasma membrane
GO	integral to plasma membrane [Amigo]  integral to plasma membrane
GO	signal transduction [Amigo]  signal transduction
GO	G-protein signaling, coupled to cyclic nucleotide second messenger [Amigo]  G-protein signaling, coupled to cyclic nucleotide second messenger
GO	multicellular organismal development [Amigo]  multicellular organismal development
GO	UV protection [Amigo]  UV protection
KEGG	Neuroactive ligand-receptor interaction
PubGene	MC1R
TreeFam	MC1R
CTD	4157 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	MC1R Related clones (RZPD - Berlin)
	PubMed
PubMed	132 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:50:05 2008