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MCEMP1 (mast cell-expressed membrane protein 1)

Identity

Alias_namesC19orf59
chromosome 19 open reading frame 59
Alias_symbol (synonym)MGC132456
Other alias
HGNC (Hugo) MCEMP1
LocusID (NCBI) 199675
Atlas_Id 68843
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 7741943 and ends at 7744719 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MCEMP1   27291
Cards
Entrez_Gene (NCBI)MCEMP1  199675  mast cell-expressed membrane protein 1
AliasesC19orf59
GeneCards (Weizmann)MCEMP1
Ensembl hg19 (Hinxton) [Gene_View]  chr19:7741943-7744719 [Contig_View]  MCEMP1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:7741943-7744719 [Contig_View]  MCEMP1 [Vega]
TCGA cBioPortalMCEMP1
AceView (NCBI)MCEMP1
Genatlas (Paris)MCEMP1
WikiGenes199675
SOURCE (Princeton)MCEMP1
Genetics Home Reference (NIH)MCEMP1
Genomic and cartography
GoldenPath hg19 (UCSC)MCEMP1  -     chr19:7741943-7744719 +  19p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MCEMP1  -     19p13.2   [Description]    (hg38-Dec_2013)
EnsemblMCEMP1 - 19p13.2 [CytoView hg19]  MCEMP1 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIMCEMP1 [Mapview hg19]  MCEMP1 [Mapview hg38]
OMIM609565   
Gene and transcription
Genbank (Entrez)AF461155 AF461156 BC035847 BC104796 BC104798
RefSeq transcript (Entrez)NM_174918
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929413
Consensus coding sequences : CCDS (NCBI)MCEMP1
Cluster EST : UnigeneHs.709539 [ NCBI ]
CGAP (NCI)Hs.709539
Gene ExpressionMCEMP1 [ NCBI-GEO ]   MCEMP1 [ EBI - ARRAY_EXPRESS ]   MCEMP1 [ SEEK ]   MCEMP1 [ MEM ]
Gene Expression Viewer (FireBrowse)MCEMP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)199675
GTEX Portal (Tissue expression)MCEMP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IX19   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IX19  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IX19
Splice isoforms : SwissVarQ8IX19
PhosPhoSitePlusQ8IX19
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MCEMP1
DMDM Disease mutations199675
Blocks (Seattle)MCEMP1
SuperfamilyQ8IX19
Peptide AtlasQ8IX19
HPRD14119
IPIIPI00293183   
Protein Interaction databases
DIP (DOE-UCLA)Q8IX19
IntAct (EBI)Q8IX19
BioGRIDMCEMP1
STRING (EMBL)MCEMP1
ZODIACMCEMP1
Ontologies - Pathways
QuickGOQ8IX19
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkMCEMP1
Atlas of Cancer Signalling NetworkMCEMP1
Wikipedia pathwaysMCEMP1
Orthology - Evolution
OrthoDB199675
Phylogenetic Trees/Animal Genes : TreeFamMCEMP1
HOVERGENQ8IX19
HOGENOMQ8IX19
Homologs : HomoloGeneMCEMP1
Homology/Alignments : Family Browser (UCSC)MCEMP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMCEMP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MCEMP1
dbVarMCEMP1
ClinVarMCEMP1
1000_GenomesMCEMP1 
Exome Variant ServerMCEMP1
ExAC (Exome Aggregation Consortium)MCEMP1 (select the gene name)
Genetic variants : HAPMAP199675
Genomic Variants (DGV)MCEMP1 [DGVbeta]
DECIPHER (Syndromes)19:7741943-7744719  
CONAN: Copy Number AnalysisMCEMP1 
Mutations
ICGC Data PortalMCEMP1 
TCGA Data PortalMCEMP1 
Broad Tumor PortalMCEMP1
OASIS PortalMCEMP1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMCEMP1
BioMutasearch MCEMP1
DgiDB (Drug Gene Interaction Database)MCEMP1
DoCM (Curated mutations)MCEMP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MCEMP1 (select a term)
intoGenMCEMP1
Cancer3DMCEMP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609565   
Orphanet
MedgenMCEMP1
Genetic Testing Registry MCEMP1
NextProtQ8IX19 [Medical]
TSGene199675
GENETestsMCEMP1
Huge Navigator MCEMP1 [HugePedia]
snp3D : Map Gene to Disease199675
BioCentury BCIQMCEMP1
ClinGenMCEMP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD199675
Chemical/Pharm GKB GenePA162378700
Clinical trialMCEMP1
Miscellaneous
canSAR (ICR)MCEMP1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMCEMP1
EVEXMCEMP1
GoPubMedMCEMP1
iHOPMCEMP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:27:50 CET 2017

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