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MCF2 (MCF.2 cell line derived transforming sequence)

Identity

Alias (NCBI)ARHGEF21
DBL
HGNC (Hugo) MCF2
HGNC Alias symbDBL
ARHGEF21
HGNC Alias nameOncogene MCF2 (oncogene DBL)
LocusID (NCBI) 4168
Atlas_Id 41315
Location Xq27.1  [Link to chromosome band Xq27]
Location_base_pair Starts at 139581770 and ends at 139642903 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DHX57 (2p22.1)::MCF2 (Xq27.1)DIXDC1 (11q23.1)::MCF2 (Xq27.1)MCF2 (Xq27.1)::MYB (6q23.3)
TMOD3 (15q21.2)::MCF2 (Xq27.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MCF2   6940
Cards
Entrez_Gene (NCBI)MCF2    MCF.2 cell line derived transforming sequence
AliasesARHGEF21; DBL
GeneCards (Weizmann)MCF2
Ensembl hg19 (Hinxton)ENSG00000101977 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000101977 [Gene_View]  ENSG00000101977 [Sequence]  chrX:139581770-139642903 [Contig_View]  MCF2 [Vega]
ICGC DataPortalENSG00000101977
TCGA cBioPortalMCF2
AceView (NCBI)MCF2
Genatlas (Paris)MCF2
SOURCE (Princeton)MCF2
Genetics Home Reference (NIH)MCF2
Genomic and cartography
GoldenPath hg38 (UCSC)MCF2  -     chrX:139581770-139642903 -  Xq27.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MCF2  -     Xq27.1   [Description]    (hg19-Feb_2009)
GoldenPathMCF2 - Xq27.1 [CytoView hg19]  MCF2 - Xq27.1 [CytoView hg38]
ImmunoBaseENSG00000101977
Genome Data Viewer NCBIMCF2 [Mapview hg19]  
OMIM311030   
Gene and transcription
Genbank (Entrez)AB085901 AB085902 AK296488 AK296529 AK302957
RefSeq transcript (Entrez)NM_001099855 NM_001171876 NM_001171877 NM_001171878 NM_001171879 NM_005369
Consensus coding sequences : CCDS (NCBI)MCF2
Gene ExpressionMCF2 [ NCBI-GEO ]   MCF2 [ EBI - ARRAY_EXPRESS ]   MCF2 [ SEEK ]   MCF2 [ MEM ]
Gene Expression Viewer (FireBrowse)MCF2 [ Firebrowse - Broad ]
GenevisibleExpression of MCF2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4168
GTEX Portal (Tissue expression)MCF2
Human Protein AtlasENSG00000101977-MCF2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MCF2
Human Protein Atlas [tissue]ENSG00000101977-MCF2 [tissue]
HPRD02406
Protein Interaction databases
BioGRIDMCF2
STRING (EMBL)MCF2
ZODIACMCF2
Ontologies - Pathways
Litterature
PubMed38 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMCF2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sun Jan 16 18:19:54 CET 2022

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