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MCIDAS (multiciliate differentiation and DNA synthesis associated cell cycle protein)

Identity

Alias_namesMCIN
multiciliate cell differentiation 1
Alias_symbol (synonym)MCI
IDAS
Other alias
HGNC (Hugo) MCIDAS
LocusID (NCBI) 345643
Atlas_Id 56246
Location 5q11.2  [Link to chromosome band 5q11]
Location_base_pair Starts at 54515425 and ends at 54523143 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MCIDAS   40050
Cards
Entrez_Gene (NCBI)MCIDAS  345643  multiciliate differentiation and DNA synthesis associated cell cycle protein
AliasesIDAS; MCI; MCIN
GeneCards (Weizmann)MCIDAS
Ensembl hg19 (Hinxton)ENSG00000234602 [Gene_View]  chr5:54515425-54523143 [Contig_View]  MCIDAS [Vega]
Ensembl hg38 (Hinxton)ENSG00000234602 [Gene_View]  chr5:54515425-54523143 [Contig_View]  MCIDAS [Vega]
ICGC DataPortalENSG00000234602
TCGA cBioPortalMCIDAS
AceView (NCBI)MCIDAS
Genatlas (Paris)MCIDAS
WikiGenes345643
SOURCE (Princeton)MCIDAS
Genetics Home Reference (NIH)MCIDAS
Genomic and cartography
GoldenPath hg19 (UCSC)MCIDAS  -     chr5:54515425-54523143 -  5q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MCIDAS  -     5q11.2   [Description]    (hg38-Dec_2013)
EnsemblMCIDAS - 5q11.2 [CytoView hg19]  MCIDAS - 5q11.2 [CytoView hg38]
Mapping of homologs : NCBIMCIDAS [Mapview hg19]  MCIDAS [Mapview hg38]
OMIM614086   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001190787
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MCIDAS
Cluster EST : UnigeneHs.394578 [ NCBI ]
CGAP (NCI)Hs.394578
Alternative Splicing GalleryENSG00000234602
Gene ExpressionMCIDAS [ NCBI-GEO ]   MCIDAS [ EBI - ARRAY_EXPRESS ]   MCIDAS [ SEEK ]   MCIDAS [ MEM ]
Gene Expression Viewer (FireBrowse)MCIDAS [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)345643
GTEX Portal (Tissue expression)MCIDAS
Protein : pattern, domain, 3D structure
UniProt/SwissProtD6RGH6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtD6RGH6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProD6RGH6
Splice isoforms : SwissVarD6RGH6
PhosPhoSitePlusD6RGH6
Domains : Interpro (EBI)Geminin/Multicilin    Multicilin/Idas   
Domain families : Pfam (Sanger)Geminin (PF07412)   
Domain families : Pfam (NCBI)pfam07412   
Conserved Domain (NCBI)MCIDAS
DMDM Disease mutations345643
Blocks (Seattle)MCIDAS
PDB (SRS)4BRY   
PDB (PDBSum)4BRY   
PDB (IMB)4BRY   
PDB (RSDB)4BRY   
Structural Biology KnowledgeBase4BRY   
SCOP (Structural Classification of Proteins)4BRY   
CATH (Classification of proteins structures)4BRY   
SuperfamilyD6RGH6
Human Protein AtlasENSG00000234602
Peptide AtlasD6RGH6
IPIIPI00748260   IPI00967170   
Protein Interaction databases
DIP (DOE-UCLA)D6RGH6
IntAct (EBI)D6RGH6
FunCoupENSG00000234602
BioGRIDMCIDAS
STRING (EMBL)MCIDAS
ZODIACMCIDAS
Ontologies - Pathways
QuickGOD6RGH6
Ontology : AmiGOtranscription coactivator activity  protein binding  nucleus  nucleolus  regulation of DNA replication  transcription, DNA-templated  cell cycle  regulation of mitotic cell cycle  cilium assembly  motile cilium assembly  motile cilium assembly  positive regulation of transcription from RNA polymerase II promoter  centriole assembly  multi-ciliated epithelial cell differentiation  
Ontology : EGO-EBItranscription coactivator activity  protein binding  nucleus  nucleolus  regulation of DNA replication  transcription, DNA-templated  cell cycle  regulation of mitotic cell cycle  cilium assembly  motile cilium assembly  motile cilium assembly  positive regulation of transcription from RNA polymerase II promoter  centriole assembly  multi-ciliated epithelial cell differentiation  
NDEx NetworkMCIDAS
Atlas of Cancer Signalling NetworkMCIDAS
Wikipedia pathwaysMCIDAS
Orthology - Evolution
OrthoDB345643
GeneTree (enSembl)ENSG00000234602
Phylogenetic Trees/Animal Genes : TreeFamMCIDAS
HOVERGEND6RGH6
HOGENOMD6RGH6
Homologs : HomoloGeneMCIDAS
Homology/Alignments : Family Browser (UCSC)MCIDAS
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMCIDAS [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MCIDAS
dbVarMCIDAS
ClinVarMCIDAS
1000_GenomesMCIDAS 
Exome Variant ServerMCIDAS
ExAC (Exome Aggregation Consortium)MCIDAS (select the gene name)
Genetic variants : HAPMAP345643
Genomic Variants (DGV)MCIDAS [DGVbeta]
DECIPHER (Syndromes)5:54515425-54523143  ENSG00000234602
CONAN: Copy Number AnalysisMCIDAS 
Mutations
ICGC Data PortalMCIDAS 
TCGA Data PortalMCIDAS 
Broad Tumor PortalMCIDAS
OASIS PortalMCIDAS [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMCIDAS
BioMutasearch MCIDAS
DgiDB (Drug Gene Interaction Database)MCIDAS
DoCM (Curated mutations)MCIDAS (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MCIDAS (select a term)
intoGenMCIDAS
Cancer3DMCIDAS(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614086   
Orphanet
MedgenMCIDAS
Genetic Testing Registry MCIDAS
NextProtD6RGH6 [Medical]
TSGene345643
GENETestsMCIDAS
Huge Navigator MCIDAS [HugePedia]
snp3D : Map Gene to Disease345643
BioCentury BCIQMCIDAS
ClinGenMCIDAS
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD345643
Clinical trialMCIDAS
Miscellaneous
canSAR (ICR)MCIDAS (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMCIDAS
EVEXMCIDAS
GoPubMedMCIDAS
iHOPMCIDAS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:08:46 CEST 2017

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