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MCM3AP-AS1 (MCM3AP antisense RNA 1)

Identity

Alias_namesC21orf85
MCM3APAS
MCM3AP-AS
MCM3 minichromosome maintenance deficient 3 (S. cerevisiae) associated protein, antisense
MCM3AP antisense RNA (non-protein coding)
MCM3AP antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)FLJ10508
NCRNA00031
Other aliasMCM3APASB
HGNC (Hugo) MCM3AP-AS1
LocusID (NCBI) 114044
Atlas_Id 68850
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 46229231 and ends at 46251701 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
KANK1 (9p24.3) / MCM3AP-AS1 (21q22.3)MCM3AP-AS1 (21q22.3) / YBEY (21q22.3)UROD (1p34.1) / MCM3AP-AS1 (21q22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MCM3AP-AS1   16417
Cards
Entrez_Gene (NCBI)MCM3AP-AS1  114044  MCM3AP antisense RNA 1
AliasesC21orf85; MCM3AP-AS; MCM3APAS; MCM3APASB; 
NCRNA00031
GeneCards (Weizmann)MCM3AP-AS1
Ensembl hg19 (Hinxton)ENSG00000215424 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000215424 [Gene_View]  chr21:46229231-46251701 [Contig_View]  MCM3AP-AS1 [Vega]
ICGC DataPortalENSG00000215424
TCGA cBioPortalMCM3AP-AS1
AceView (NCBI)MCM3AP-AS1
Genatlas (Paris)MCM3AP-AS1
WikiGenes114044
SOURCE (Princeton)MCM3AP-AS1
Genetics Home Reference (NIH)MCM3AP-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)MCM3AP-AS1  -     chr21:46229231-46251701 +  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MCM3AP-AS1  -     21q22.3   [Description]    (hg19-Feb_2009)
EnsemblMCM3AP-AS1 - 21q22.3 [CytoView hg19]  MCM3AP-AS1 - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBIMCM3AP-AS1 [Mapview hg19]  MCM3AP-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF426262 AF426263 AK001370 AK054878 BC002458
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MCM3AP-AS1
Cluster EST : UnigeneHs.731747 [ NCBI ]
CGAP (NCI)Hs.731747
Alternative Splicing GalleryENSG00000215424
Gene ExpressionMCM3AP-AS1 [ NCBI-GEO ]   MCM3AP-AS1 [ EBI - ARRAY_EXPRESS ]   MCM3AP-AS1 [ SEEK ]   MCM3AP-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)MCM3AP-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)114044
GTEX Portal (Tissue expression)MCM3AP-AS1
Human Protein AtlasENSG00000215424-MCM3AP-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MCM3AP-AS1
DMDM Disease mutations114044
Blocks (Seattle)MCM3AP-AS1
Human Protein Atlas [tissue]ENSG00000215424-MCM3AP-AS1 [tissue]
IPIIPI00018244   
Protein Interaction databases
FunCoupENSG00000215424
BioGRIDMCM3AP-AS1
STRING (EMBL)MCM3AP-AS1
ZODIACMCM3AP-AS1
Ontologies - Pathways
Huge Navigator MCM3AP-AS1 [HugePedia]
snp3D : Map Gene to Disease114044
BioCentury BCIQMCM3AP-AS1
ClinGenMCM3AP-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD114044
Chemical/Pharm GKB GenePA30693
Clinical trialMCM3AP-AS1
Miscellaneous
canSAR (ICR)MCM3AP-AS1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMCM3AP-AS1
EVEXMCM3AP-AS1
GoPubMedMCM3AP-AS1
iHOPMCM3AP-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:43:05 CET 2017

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