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MCMDC2 (minichromosome maintenance domain containing 2)

Identity

Alias_namesC8orf45
chromosome 8 open reading frame 45
Alias_symbol (synonym)FLJ25692
Other alias
HGNC (Hugo) MCMDC2
LocusID (NCBI) 157777
Atlas_Id 68852
Location 8q13.1  [Link to chromosome band 8q13]
Location_base_pair Starts at 67783737 and ends at 67817599 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MCMDC2   26368
Cards
Entrez_Gene (NCBI)MCMDC2  157777  minichromosome maintenance domain containing 2
AliasesC8orf45
GeneCards (Weizmann)MCMDC2
Ensembl hg19 (Hinxton)ENSG00000178460 [Gene_View]  chr8:67783737-67817599 [Contig_View]  MCMDC2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000178460 [Gene_View]  chr8:67783737-67817599 [Contig_View]  MCMDC2 [Vega]
ICGC DataPortalENSG00000178460
TCGA cBioPortalMCMDC2
AceView (NCBI)MCMDC2
Genatlas (Paris)MCMDC2
WikiGenes157777
SOURCE (Princeton)MCMDC2
Genetics Home Reference (NIH)MCMDC2
Genomic and cartography
GoldenPath hg19 (UCSC)MCMDC2  -     chr8:67783737-67817599 +  8q13.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MCMDC2  -     8q13.1   [Description]    (hg38-Dec_2013)
EnsemblMCMDC2 - 8q13.1 [CytoView hg19]  MCMDC2 - 8q13.1 [CytoView hg38]
Mapping of homologs : NCBIMCMDC2 [Mapview hg19]  MCMDC2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA928149 AK098558 AK302169 AK302672 AK303003
RefSeq transcript (Entrez)NM_001136160 NM_001136161 NM_173518
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_008183 NW_004929339
Consensus coding sequences : CCDS (NCBI)MCMDC2
Cluster EST : UnigeneHs.437006 [ NCBI ]
CGAP (NCI)Hs.437006
Alternative Splicing GalleryENSG00000178460
Gene ExpressionMCMDC2 [ NCBI-GEO ]   MCMDC2 [ EBI - ARRAY_EXPRESS ]   MCMDC2 [ SEEK ]   MCMDC2 [ MEM ]
Gene Expression Viewer (FireBrowse)MCMDC2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)157777
GTEX Portal (Tissue expression)MCMDC2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ4G0Z9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ4G0Z9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ4G0Z9
Splice isoforms : SwissVarQ4G0Z9
PhosPhoSitePlusQ4G0Z9
Domains : Interpro (EBI)MCM_DNA-dep_ATPase   
Domain families : Pfam (Sanger)MCM (PF00493)   
Domain families : Pfam (NCBI)pfam00493   
Conserved Domain (NCBI)MCMDC2
DMDM Disease mutations157777
Blocks (Seattle)MCMDC2
SuperfamilyQ4G0Z9
Human Protein AtlasENSG00000178460
Peptide AtlasQ4G0Z9
HPRD08072
IPIIPI00176216   IPI00914651   IPI00956193   IPI00956236   IPI00927743   IPI00927886   IPI00745987   IPI00927388   IPI00982679   
Protein Interaction databases
DIP (DOE-UCLA)Q4G0Z9
IntAct (EBI)Q4G0Z9
FunCoupENSG00000178460
BioGRIDMCMDC2
STRING (EMBL)MCMDC2
ZODIACMCMDC2
Ontologies - Pathways
QuickGOQ4G0Z9
Ontology : AmiGODNA binding  ATP binding  DNA replication  
Ontology : EGO-EBIDNA binding  ATP binding  DNA replication  
NDEx NetworkMCMDC2
Atlas of Cancer Signalling NetworkMCMDC2
Wikipedia pathwaysMCMDC2
Orthology - Evolution
OrthoDB157777
GeneTree (enSembl)ENSG00000178460
Phylogenetic Trees/Animal Genes : TreeFamMCMDC2
HOVERGENQ4G0Z9
HOGENOMQ4G0Z9
Homologs : HomoloGeneMCMDC2
Homology/Alignments : Family Browser (UCSC)MCMDC2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMCMDC2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MCMDC2
dbVarMCMDC2
ClinVarMCMDC2
1000_GenomesMCMDC2 
Exome Variant ServerMCMDC2
ExAC (Exome Aggregation Consortium)MCMDC2 (select the gene name)
Genetic variants : HAPMAP157777
Genomic Variants (DGV)MCMDC2 [DGVbeta]
DECIPHER (Syndromes)8:67783737-67817599  ENSG00000178460
CONAN: Copy Number AnalysisMCMDC2 
Mutations
ICGC Data PortalMCMDC2 
TCGA Data PortalMCMDC2 
Broad Tumor PortalMCMDC2
OASIS PortalMCMDC2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMCMDC2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMCMDC2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MCMDC2
DgiDB (Drug Gene Interaction Database)MCMDC2
DoCM (Curated mutations)MCMDC2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MCMDC2 (select a term)
intoGenMCMDC2
Cancer3DMCMDC2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMCMDC2
Genetic Testing Registry MCMDC2
NextProtQ4G0Z9 [Medical]
TSGene157777
GENETestsMCMDC2
Huge Navigator MCMDC2 [HugePedia]
snp3D : Map Gene to Disease157777
BioCentury BCIQMCMDC2
ClinGenMCMDC2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD157777
Chemical/Pharm GKB GenePA142672364
Clinical trialMCMDC2
Miscellaneous
canSAR (ICR)MCMDC2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMCMDC2
EVEXMCMDC2
GoPubMedMCMDC2
iHOPMCMDC2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:27:52 CET 2017

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