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MCRIP1 (MAPK regulated corepressor interacting protein 1)

Identity

Alias_namesFAM195B
family with sequence similarity 195, member B
family with sequence similarity 195 member B
Alias_symbol (synonym)GRAN2
MCRIP
Other alias
HGNC (Hugo) MCRIP1
LocusID (NCBI) 348262
Atlas_Id 78426
Location 17q25.3  [Link to chromosome band 17q25]
Location_base_pair Starts at 81822361 and ends at 81833294 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MCRIP1   28007
Cards
Entrez_Gene (NCBI)MCRIP1  348262  MAPK regulated corepressor interacting protein 1
AliasesFAM195B; GRAN2; MCRIP
GeneCards (Weizmann)MCRIP1
Ensembl hg19 (Hinxton)ENSG00000225663 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225663 [Gene_View]  chr17:81822361-81833294 [Contig_View]  MCRIP1 [Vega]
ICGC DataPortalENSG00000225663
TCGA cBioPortalMCRIP1
AceView (NCBI)MCRIP1
Genatlas (Paris)MCRIP1
WikiGenes348262
SOURCE (Princeton)MCRIP1
Genetics Home Reference (NIH)MCRIP1
Genomic and cartography
GoldenPath hg38 (UCSC)MCRIP1  -     chr17:81822361-81833294 -  17q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MCRIP1  -     17q25.3   [Description]    (hg19-Feb_2009)
EnsemblMCRIP1 - 17q25.3 [CytoView hg19]  MCRIP1 - 17q25.3 [CytoView hg38]
Mapping of homologs : NCBIMCRIP1 [Mapview hg19]  MCRIP1 [Mapview hg38]
OMIM616514   
Gene and transcription
Genbank (Entrez)AK000852 AK125584 BC017108 BC019318 BC041068
RefSeq transcript (Entrez)NM_001093767 NM_001288798 NM_001288799 NM_207368
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MCRIP1
Cluster EST : UnigeneHs.514632 [ NCBI ]
CGAP (NCI)Hs.514632
Alternative Splicing GalleryENSG00000225663
Gene ExpressionMCRIP1 [ NCBI-GEO ]   MCRIP1 [ EBI - ARRAY_EXPRESS ]   MCRIP1 [ SEEK ]   MCRIP1 [ MEM ]
Gene Expression Viewer (FireBrowse)MCRIP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)348262
GTEX Portal (Tissue expression)MCRIP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtC9JLW8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtC9JLW8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProC9JLW8
Splice isoforms : SwissVarC9JLW8
PhosPhoSitePlusC9JLW8
Domains : Interpro (EBI)MCRIP   
Domain families : Pfam (Sanger)FAM195 (PF14799)   
Domain families : Pfam (NCBI)pfam14799   
Conserved Domain (NCBI)MCRIP1
DMDM Disease mutations348262
Blocks (Seattle)MCRIP1
SuperfamilyC9JLW8
Human Protein AtlasENSG00000225663
Peptide AtlasC9JLW8
HPRD14179
IPIIPI00746221   
Protein Interaction databases
DIP (DOE-UCLA)C9JLW8
IntAct (EBI)C9JLW8
FunCoupENSG00000225663
BioGRIDMCRIP1
STRING (EMBL)MCRIP1
ZODIACMCRIP1
Ontologies - Pathways
QuickGOC9JLW8
Ontology : AmiGOprotein binding  nucleus  cytoplasm  cytoplasmic stress granule  regulation of epithelial to mesenchymal transition  
Ontology : EGO-EBIprotein binding  nucleus  cytoplasm  cytoplasmic stress granule  regulation of epithelial to mesenchymal transition  
NDEx NetworkMCRIP1
Atlas of Cancer Signalling NetworkMCRIP1
Wikipedia pathwaysMCRIP1
Orthology - Evolution
OrthoDB348262
GeneTree (enSembl)ENSG00000225663
Phylogenetic Trees/Animal Genes : TreeFamMCRIP1
HOVERGENC9JLW8
HOGENOMC9JLW8
Homologs : HomoloGeneMCRIP1
Homology/Alignments : Family Browser (UCSC)MCRIP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMCRIP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MCRIP1
dbVarMCRIP1
ClinVarMCRIP1
1000_GenomesMCRIP1 
Exome Variant ServerMCRIP1
ExAC (Exome Aggregation Consortium)MCRIP1 (select the gene name)
Genetic variants : HAPMAP348262
Genomic Variants (DGV)MCRIP1 [DGVbeta]
DECIPHERMCRIP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMCRIP1 
Mutations
ICGC Data PortalMCRIP1 
TCGA Data PortalMCRIP1 
Broad Tumor PortalMCRIP1
OASIS PortalMCRIP1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMCRIP1
BioMutasearch MCRIP1
DgiDB (Drug Gene Interaction Database)MCRIP1
DoCM (Curated mutations)MCRIP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MCRIP1 (select a term)
intoGenMCRIP1
Cancer3DMCRIP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616514   
Orphanet
MedgenMCRIP1
Genetic Testing Registry MCRIP1
NextProtC9JLW8 [Medical]
TSGene348262
GENETestsMCRIP1
Target ValidationMCRIP1
Huge Navigator MCRIP1 [HugePedia]
snp3D : Map Gene to Disease348262
BioCentury BCIQMCRIP1
ClinGenMCRIP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD348262
Chemical/Pharm GKB GenePA165431912
Clinical trialMCRIP1
Miscellaneous
canSAR (ICR)MCRIP1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMCRIP1
EVEXMCRIP1
GoPubMedMCRIP1
iHOPMCRIP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:25:41 CEST 2017

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