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MCRIP2 (MAPK regulated corepressor interacting protein 2)

Identity

Alias_namesC16orf14
FAM195A
chromosome 16 open reading frame 14
family with sequence similarity 195, member A
family with sequence similarity 195 member A
Alias_symbol (synonym)MGC15416
Other aliasc349E10.1
HGNC (Hugo) MCRIP2
LocusID (NCBI) 84331
Atlas_Id 78465
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 641804 and ends at 648474 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MCRIP2   14142
Cards
Entrez_Gene (NCBI)MCRIP2  84331  MAPK regulated corepressor interacting protein 2
AliasesC16orf14; FAM195A; c349E10.1
GeneCards (Weizmann)MCRIP2
Ensembl hg19 (Hinxton)ENSG00000172366 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000172366 [Gene_View]  chr16:641804-648474 [Contig_View]  MCRIP2 [Vega]
ICGC DataPortalENSG00000172366
TCGA cBioPortalMCRIP2
AceView (NCBI)MCRIP2
Genatlas (Paris)MCRIP2
WikiGenes84331
SOURCE (Princeton)MCRIP2
Genetics Home Reference (NIH)MCRIP2
Genomic and cartography
GoldenPath hg38 (UCSC)MCRIP2  -     chr16:641804-648474 +  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MCRIP2  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblMCRIP2 - 16p13.3 [CytoView hg19]  MCRIP2 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBIMCRIP2 [Mapview hg19]  MCRIP2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF386504 AJ709169 AK054811 BC001912 BC007346
RefSeq transcript (Entrez)NM_001331229 NM_001331230 NM_032371 NM_138418
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MCRIP2
Cluster EST : UnigeneHs.706105 [ NCBI ]
CGAP (NCI)Hs.706105
Alternative Splicing GalleryENSG00000172366
Gene ExpressionMCRIP2 [ NCBI-GEO ]   MCRIP2 [ EBI - ARRAY_EXPRESS ]   MCRIP2 [ SEEK ]   MCRIP2 [ MEM ]
Gene Expression Viewer (FireBrowse)MCRIP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84331
GTEX Portal (Tissue expression)MCRIP2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BUT9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BUT9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BUT9
Splice isoforms : SwissVarQ9BUT9
PhosPhoSitePlusQ9BUT9
Domains : Interpro (EBI)MCRIP   
Domain families : Pfam (Sanger)FAM195 (PF14799)   
Domain families : Pfam (NCBI)pfam14799   
Conserved Domain (NCBI)MCRIP2
DMDM Disease mutations84331
Blocks (Seattle)MCRIP2
SuperfamilyQ9BUT9
Human Protein AtlasENSG00000172366
Peptide AtlasQ9BUT9
HPRD17503
IPIIPI00042604   IPI00056315   IPI00063942   
Protein Interaction databases
DIP (DOE-UCLA)Q9BUT9
IntAct (EBI)Q9BUT9
FunCoupENSG00000172366
BioGRIDMCRIP2
STRING (EMBL)MCRIP2
ZODIACMCRIP2
Ontologies - Pathways
QuickGOQ9BUT9
Ontology : AmiGOprotein binding  nucleus  cytoplasm  cytoplasmic stress granule  
Ontology : EGO-EBIprotein binding  nucleus  cytoplasm  cytoplasmic stress granule  
NDEx NetworkMCRIP2
Atlas of Cancer Signalling NetworkMCRIP2
Wikipedia pathwaysMCRIP2
Orthology - Evolution
OrthoDB84331
GeneTree (enSembl)ENSG00000172366
Phylogenetic Trees/Animal Genes : TreeFamMCRIP2
HOVERGENQ9BUT9
HOGENOMQ9BUT9
Homologs : HomoloGeneMCRIP2
Homology/Alignments : Family Browser (UCSC)MCRIP2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMCRIP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MCRIP2
dbVarMCRIP2
ClinVarMCRIP2
1000_GenomesMCRIP2 
Exome Variant ServerMCRIP2
ExAC (Exome Aggregation Consortium)MCRIP2 (select the gene name)
Genetic variants : HAPMAP84331
Genomic Variants (DGV)MCRIP2 [DGVbeta]
DECIPHERMCRIP2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMCRIP2 
Mutations
ICGC Data PortalMCRIP2 
TCGA Data PortalMCRIP2 
Broad Tumor PortalMCRIP2
OASIS PortalMCRIP2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMCRIP2
BioMutasearch MCRIP2
DgiDB (Drug Gene Interaction Database)MCRIP2
DoCM (Curated mutations)MCRIP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MCRIP2 (select a term)
intoGenMCRIP2
Cancer3DMCRIP2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMCRIP2
Genetic Testing Registry MCRIP2
NextProtQ9BUT9 [Medical]
TSGene84331
GENETestsMCRIP2
Target ValidationMCRIP2
Huge Navigator MCRIP2 [HugePedia]
snp3D : Map Gene to Disease84331
BioCentury BCIQMCRIP2
ClinGenMCRIP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84331
Chemical/Pharm GKB GenePA25527
Clinical trialMCRIP2
Miscellaneous
canSAR (ICR)MCRIP2 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMCRIP2
EVEXMCRIP2
GoPubMedMCRIP2
iHOPMCRIP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:25:42 CEST 2017

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