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MDFIC (MyoD family inhibitor domain containing)

Identity

Alias_symbol (synonym)HIC
Other aliasMDFIC1
HGNC (Hugo) MDFIC
LocusID (NCBI) 29969
Atlas_Id 68859
Location 7q31.1  [Link to chromosome band 7q31]
Location_base_pair Starts at 114922154 and ends at 115019916 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MDFIC   28870
Cards
Entrez_Gene (NCBI)MDFIC  29969  MyoD family inhibitor domain containing
AliasesHIC; MDFIC1
GeneCards (Weizmann)MDFIC
Ensembl hg19 (Hinxton)ENSG00000135272 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000135272 [Gene_View]  chr7:114922154-115019916 [Contig_View]  MDFIC [Vega]
ICGC DataPortalENSG00000135272
TCGA cBioPortalMDFIC
AceView (NCBI)MDFIC
Genatlas (Paris)MDFIC
WikiGenes29969
SOURCE (Princeton)MDFIC
Genetics Home Reference (NIH)MDFIC
Genomic and cartography
GoldenPath hg38 (UCSC)MDFIC  -     chr7:114922154-115019916 +  7q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MDFIC  -     7q31.1   [Description]    (hg19-Feb_2009)
EnsemblMDFIC - 7q31.1 [CytoView hg19]  MDFIC - 7q31.1 [CytoView hg38]
Mapping of homologs : NCBIMDFIC [Mapview hg19]  MDFIC [Mapview hg38]
OMIM614511   
Gene and transcription
Genbank (Entrez)AA406528 AF054589 AF054589 AI668639 AY196485
RefSeq transcript (Entrez)NM_001166345 NM_001166346 NM_199072
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MDFIC
Cluster EST : UnigeneHs.741413 [ NCBI ]
CGAP (NCI)Hs.741413
Alternative Splicing GalleryENSG00000135272
Gene ExpressionMDFIC [ NCBI-GEO ]   MDFIC [ EBI - ARRAY_EXPRESS ]   MDFIC [ SEEK ]   MDFIC [ MEM ]
Gene Expression Viewer (FireBrowse)MDFIC [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)29969
GTEX Portal (Tissue expression)MDFIC
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P1T7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P1T7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P1T7
Splice isoforms : SwissVarQ9P1T7
PhosPhoSitePlusQ9P1T7
Domains : Interpro (EBI)MDFI/MDFIC   
Domain families : Pfam (Sanger)MDFI (PF15316)   
Domain families : Pfam (NCBI)pfam15316   
Conserved Domain (NCBI)MDFIC
DMDM Disease mutations29969
Blocks (Seattle)MDFIC
SuperfamilyQ9P1T7
Human Protein AtlasENSG00000135272
Peptide AtlasQ9P1T7
HPRD17103
IPIIPI00292793   IPI00829611   IPI00926547   IPI00926364   IPI00978257   IPI00984592   
Protein Interaction databases
DIP (DOE-UCLA)Q9P1T7
IntAct (EBI)Q9P1T7
FunCoupENSG00000135272
BioGRIDMDFIC
STRING (EMBL)MDFIC
ZODIACMDFIC
Ontologies - Pathways
QuickGOQ9P1T7
Ontology : AmiGOprotein binding  nucleus  nucleolus  cytoplasm  transcription, DNA-templated  activation of JUN kinase activity  transcription factor binding  viral process  regulation of Wnt signaling pathway  cyclin binding  Tat protein binding  negative regulation of protein import into nucleus  negative regulation of transcription, DNA-templated  negative regulation of transcription, DNA-templated  positive regulation of transcription, DNA-templated  positive regulation of viral transcription  
Ontology : EGO-EBIprotein binding  nucleus  nucleolus  cytoplasm  transcription, DNA-templated  activation of JUN kinase activity  transcription factor binding  viral process  regulation of Wnt signaling pathway  cyclin binding  Tat protein binding  negative regulation of protein import into nucleus  negative regulation of transcription, DNA-templated  negative regulation of transcription, DNA-templated  positive regulation of transcription, DNA-templated  positive regulation of viral transcription  
NDEx NetworkMDFIC
Atlas of Cancer Signalling NetworkMDFIC
Wikipedia pathwaysMDFIC
Orthology - Evolution
OrthoDB29969
GeneTree (enSembl)ENSG00000135272
Phylogenetic Trees/Animal Genes : TreeFamMDFIC
HOVERGENQ9P1T7
HOGENOMQ9P1T7
Homologs : HomoloGeneMDFIC
Homology/Alignments : Family Browser (UCSC)MDFIC
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMDFIC [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MDFIC
dbVarMDFIC
ClinVarMDFIC
1000_GenomesMDFIC 
Exome Variant ServerMDFIC
ExAC (Exome Aggregation Consortium)MDFIC (select the gene name)
Genetic variants : HAPMAP29969
Genomic Variants (DGV)MDFIC [DGVbeta]
DECIPHERMDFIC [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMDFIC 
Mutations
ICGC Data PortalMDFIC 
TCGA Data PortalMDFIC 
Broad Tumor PortalMDFIC
OASIS PortalMDFIC [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMDFIC  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMDFIC
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MDFIC
DgiDB (Drug Gene Interaction Database)MDFIC
DoCM (Curated mutations)MDFIC (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MDFIC (select a term)
intoGenMDFIC
Cancer3DMDFIC(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614511   
Orphanet
MedgenMDFIC
Genetic Testing Registry MDFIC
NextProtQ9P1T7 [Medical]
TSGene29969
GENETestsMDFIC
Target ValidationMDFIC
Huge Navigator MDFIC [HugePedia]
snp3D : Map Gene to Disease29969
BioCentury BCIQMDFIC
ClinGenMDFIC
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD29969
Chemical/Pharm GKB GenePA142671474
Clinical trialMDFIC
Miscellaneous
canSAR (ICR)MDFIC (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMDFIC
EVEXMDFIC
GoPubMedMDFIC
iHOPMDFIC
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:25:43 CEST 2017

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