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MEA1 (male-enhanced antigen 1)

Identity

Alias (NCBI)HYS
MEA
HGNC (Hugo) MEA1
HGNC Previous nameMEA
HGNC Previous namemale-enhanced antigen
LocusID (NCBI) 4201
Atlas_Id 68867
Location 6p21.1  [Link to chromosome band 6p21]
Location_base_pair Starts at 43012013 and ends at 43013914 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MEA1 (6p21.1) / MEA1 (6p21.1)MEA1 (6p21.1) / S100A6 (1q21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MEA1   6986
Cards
Entrez_Gene (NCBI)MEA1  4201  male-enhanced antigen 1
AliasesHYS; MEA
GeneCards (Weizmann)MEA1
Ensembl hg19 (Hinxton)ENSG00000124733 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000124733 [Gene_View]  ENSG00000124733 [Sequence]  chr6:43012013-43013914 [Contig_View]  MEA1 [Vega]
ICGC DataPortalENSG00000124733
TCGA cBioPortalMEA1
AceView (NCBI)MEA1
Genatlas (Paris)MEA1
WikiGenes4201
SOURCE (Princeton)MEA1
Genetics Home Reference (NIH)MEA1
Genomic and cartography
GoldenPath hg38 (UCSC)MEA1  -     chr6:43012013-43013914 -  6p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MEA1  -     6p21.1   [Description]    (hg19-Feb_2009)
GoldenPathMEA1 - 6p21.1 [CytoView hg19]  MEA1 - 6p21.1 [CytoView hg38]
ImmunoBaseENSG00000124733
genome Data Viewer NCBIMEA1 [Mapview hg19]  
OMIM143170   
Gene and transcription
Genbank (Entrez)AA448322 AK309759 BC001754 BM450289 BM552852
RefSeq transcript (Entrez)NM_001318942 NM_001318943 NM_001363578 NM_014623
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MEA1
Alternative Splicing GalleryENSG00000124733
Gene ExpressionMEA1 [ NCBI-GEO ]   MEA1 [ EBI - ARRAY_EXPRESS ]   MEA1 [ SEEK ]   MEA1 [ MEM ]
Gene Expression Viewer (FireBrowse)MEA1 [ Firebrowse - Broad ]
GenevisibleExpression of MEA1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4201
GTEX Portal (Tissue expression)MEA1
Human Protein AtlasENSG00000124733-MEA1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ16626   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ16626  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ16626
Splice isoforms : SwissVarQ16626
PhosPhoSitePlusQ16626
Domains : Interpro (EBI)MEA1   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MEA1
DMDM Disease mutations4201
Blocks (Seattle)MEA1
SuperfamilyQ16626
Human Protein Atlas [tissue]ENSG00000124733-MEA1 [tissue]
Peptide AtlasQ16626
HPRD00885
IPIIPI00157176   
Protein Interaction databases
DIP (DOE-UCLA)Q16626
IntAct (EBI)Q16626
FunCoupENSG00000124733
BioGRIDMEA1
STRING (EMBL)MEA1
ZODIACMEA1
Ontologies - Pathways
QuickGOQ16626
Ontology : AmiGOprotein binding  spermatogenesis  male gonad development  cell differentiation  
Ontology : EGO-EBIprotein binding  spermatogenesis  male gonad development  cell differentiation  
NDEx NetworkMEA1
Atlas of Cancer Signalling NetworkMEA1
Wikipedia pathwaysMEA1
Orthology - Evolution
OrthoDB4201
GeneTree (enSembl)ENSG00000124733
Phylogenetic Trees/Animal Genes : TreeFamMEA1
HOGENOMQ16626
Homologs : HomoloGeneMEA1
Homology/Alignments : Family Browser (UCSC)MEA1
Gene fusions - Rearrangements
Fusion : QuiverMEA1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMEA1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MEA1
dbVarMEA1
ClinVarMEA1
1000_GenomesMEA1 
Exome Variant ServerMEA1
GNOMAD BrowserENSG00000124733
Varsome BrowserMEA1
Genetic variants : HAPMAP4201
Genomic Variants (DGV)MEA1 [DGVbeta]
DECIPHERMEA1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMEA1 
Mutations
ICGC Data PortalMEA1 
TCGA Data PortalMEA1 
Broad Tumor PortalMEA1
OASIS PortalMEA1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMEA1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DMEA1
Mutations and Diseases : HGMDMEA1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MEA1
DgiDB (Drug Gene Interaction Database)MEA1
DoCM (Curated mutations)MEA1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MEA1 (select a term)
intoGenMEA1
Cancer3DMEA1(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM143170   
Orphanet
DisGeNETMEA1
MedgenMEA1
Genetic Testing Registry MEA1
NextProtQ16626 [Medical]
TSGene4201
GENETestsMEA1
Target ValidationMEA1
Huge Navigator MEA1 [HugePedia]
snp3D : Map Gene to Disease4201
BioCentury BCIQMEA1
ClinGenMEA1
Clinical trials, drugs, therapy
Protein Interactions : CTD4201
Pharm GKB GenePA30726
Clinical trialMEA1
Miscellaneous
canSAR (ICR)MEA1 (select the gene name)
HarmonizomeMEA1
DataMed IndexMEA1
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMEA1
EVEXMEA1
GoPubMedMEA1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Aug 22 19:24:34 CEST 2020

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