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MEAT6 (melanoma-associated transcript 6)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105378111
Atlas_Id 55199
Location 6q27  [Link to chromosome band 6q27]
Location_base_pair Starts at 164793377 and ends at 164822063 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)MEAT6  105378111  melanoma-associated transcript 6
Aliases
GeneCards (Weizmann)MEAT6
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:164793377-164822063 [Contig_View]  MEAT6 [Vega]
TCGA cBioPortalMEAT6
AceView (NCBI)MEAT6
Genatlas (Paris)MEAT6
WikiGenes105378111
SOURCE (Princeton)MEAT6
Genetics Home Reference (NIH)MEAT6
Genomic and cartography
GoldenPath hg38 (UCSC)MEAT6  -     chr6:164793377-164822063 -  6q27   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MEAT6  -     6q27   [Description]    (hg19-Feb_2009)
EnsemblMEAT6 - 6q27 [CytoView hg19]  MEAT6 - 6q27 [CytoView hg38]
Mapping of homologs : NCBIMEAT6 [Mapview hg19]  MEAT6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA145490 DB463680 KR092906
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MEAT6
Gene ExpressionMEAT6 [ NCBI-GEO ]   MEAT6 [ EBI - ARRAY_EXPRESS ]   MEAT6 [ SEEK ]   MEAT6 [ MEM ]
Gene Expression Viewer (FireBrowse)MEAT6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105378111
GTEX Portal (Tissue expression)MEAT6
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MEAT6
DMDM Disease mutations105378111
Blocks (Seattle)MEAT6
Protein Interaction databases
BioGRIDMEAT6
STRING (EMBL)MEAT6
ZODIACMEAT6
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105378111
BioCentury BCIQMEAT6
ClinGenMEAT6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105378111
Clinical trialMEAT6
Miscellaneous
canSAR (ICR)MEAT6 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMEAT6
EVEXMEAT6
GoPubMedMEAT6
iHOPMEAT6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 11:19:28 CET 2018

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