Atlas of Genetics and Cytogenetics in Oncology and Haematology

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MED25 (mediator complex subunit 25)

Identity

Alias (NCBI)ACID1
ARC92
BVSYS
CMT2B2
P78
PTOV2
TCBAP0758
HGNC (Hugo) MED25
HGNC Alias symbARC92
ACID1
TCBAP0758
DKFZp434K0512
HGNC Previous namemediator of RNA polymerase II transcription, subunit 25 homolog (S. cerevisiae)
LocusID (NCBI) 81857
Atlas_Id 52109
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 49818279 and ends at 49836980 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MED25 (19q13.33) / AP2A1 (19q13.33)MED25 (19q13.33) / MAPK15 (8q24.3)MED25 (19q13.33) / SIGLEC12 (19q13.41)
SIRT3 (11p15.5) / MED25 (19q13.33)TBC1D17 (19q13.33) / MED25 (19q13.33)MED25 19q13.33 / AP2A1 19q13.33
MED25 19q13.33 / MAPK15 8q24.3MED25 19q13.33 / SIGLEC12 19q13.41

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MED25   28845
LRG (Locus Reference Genomic)LRG_368
Cards
Entrez_Gene (NCBI)MED25    mediator complex subunit 25
AliasesACID1; ARC92; BVSYS; CMT2B2; 
P78; PTOV2; TCBAP0758
GeneCards (Weizmann)MED25
Ensembl hg19 (Hinxton)ENSG00000104973 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000104973 [Gene_View]  ENSG00000104973 [Sequence]  chr19:49818279-49836980 [Contig_View]  MED25 [Vega]
ICGC DataPortalENSG00000104973
TCGA cBioPortalMED25
AceView (NCBI)MED25
Genatlas (Paris)MED25
SOURCE (Princeton)MED25
Genetics Home Reference (NIH)MED25
Genomic and cartography
GoldenPath hg38 (UCSC)MED25  -     chr19:49818279-49836980 +  19q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MED25  -     19q13.33   [Description]    (hg19-Feb_2009)
GoldenPathMED25 - 19q13.33 [CytoView hg19]  MED25 - 19q13.33 [CytoView hg38]
ImmunoBaseENSG00000104973
genome Data Viewer NCBIMED25 [Mapview hg19]  
OMIM605589   610197   616449   
Gene and transcription
Genbank (Entrez)AF261072 AF283769 AF447873 AJ617479 AK055844
RefSeq transcript (Entrez)NM_001378355 NM_030973
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MED25
Alternative Splicing GalleryENSG00000104973
Gene ExpressionMED25 [ NCBI-GEO ]   MED25 [ EBI - ARRAY_EXPRESS ]   MED25 [ SEEK ]   MED25 [ MEM ]
Gene Expression Viewer (FireBrowse)MED25 [ Firebrowse - Broad ]
GenevisibleExpression of MED25 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)81857
GTEX Portal (Tissue expression)MED25
Human Protein AtlasENSG00000104973-MED25 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MED25
Blocks (Seattle)MED25
Human Protein Atlas [tissue]ENSG00000104973-MED25 [tissue]
HPRD14380
IPIIPI00479592   IPI00418271   IPI00867552   IPI00163419   IPI00867722   IPI00953122   IPI00923525   IPI00923536   IPI00923617   IPI00923603   IPI00923442   IPI00744110   IPI00873857   IPI00923562   IPI00434725   
Protein Interaction databases
BioGRIDMED25
STRING (EMBL)MED25
ZODIACMED25
Ontologies - Pathways
Litterature
PubMed62 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMED25
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 25 19:31:25 CET 2021
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