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MEF2BNB (MEF2B neighbor)

Identity

Other alias-
HGNC (Hugo) MEF2BNB
LocusID (NCBI) 729991
Atlas_Id 68889
Location 19p13.11  [Link to chromosome band 19p13]
Location_base_pair Starts at 19292685 and ends at 19303400 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MEF2BNB   37247
Cards
Entrez_Gene (NCBI)MEF2BNB  729991  MEF2B neighbor
Aliases
GeneCards (Weizmann)MEF2BNB
Ensembl hg19 (Hinxton)ENSG00000064489 [Gene_View]  chr19:19292685-19303400 [Contig_View]  MEF2BNB [Vega]
Ensembl hg38 (Hinxton)ENSG00000064489 [Gene_View]  chr19:19292685-19303400 [Contig_View]  MEF2BNB [Vega]
ICGC DataPortalENSG00000064489
TCGA cBioPortalMEF2BNB
AceView (NCBI)MEF2BNB
Genatlas (Paris)MEF2BNB
WikiGenes729991
SOURCE (Princeton)MEF2BNB
Genetics Home Reference (NIH)MEF2BNB
Genomic and cartography
GoldenPath hg19 (UCSC)MEF2BNB  -     chr19:19292685-19303400 -  19p13.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MEF2BNB  -     19p13.11   [Description]    (hg38-Dec_2013)
EnsemblMEF2BNB - 19p13.11 [CytoView hg19]  MEF2BNB - 19p13.11 [CytoView hg38]
Mapping of homologs : NCBIMEF2BNB [Mapview hg19]  MEF2BNB [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057161 AK128256 BC000489 BC004449 BC010178
RefSeq transcript (Entrez)NM_001145783 NM_001145784
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929414
Consensus coding sequences : CCDS (NCBI)MEF2BNB
Cluster EST : UnigeneHs.153629 [ NCBI ]
CGAP (NCI)Hs.153629
Alternative Splicing GalleryENSG00000064489
Gene ExpressionMEF2BNB [ NCBI-GEO ]   MEF2BNB [ EBI - ARRAY_EXPRESS ]   MEF2BNB [ SEEK ]   MEF2BNB [ MEM ]
Gene Expression Viewer (FireBrowse)MEF2BNB [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)729991
GTEX Portal (Tissue expression)MEF2BNB
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96FH0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96FH0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96FH0
Splice isoforms : SwissVarQ96FH0
PhosPhoSitePlusQ96FH0
Domains : Interpro (EBI)UPF0402_NEP   
Domain families : Pfam (Sanger)NEP (PF10167)   
Domain families : Pfam (NCBI)pfam10167   
Conserved Domain (NCBI)MEF2BNB
DMDM Disease mutations729991
Blocks (Seattle)MEF2BNB
SuperfamilyQ96FH0
Human Protein AtlasENSG00000064489
Peptide AtlasQ96FH0
IPIIPI00386642   IPI00816037   
Protein Interaction databases
DIP (DOE-UCLA)Q96FH0
IntAct (EBI)Q96FH0
FunCoupENSG00000064489
BioGRIDMEF2BNB
STRING (EMBL)MEF2BNB
ZODIACMEF2BNB
Ontologies - Pathways
QuickGOQ96FH0
Ontology : AmiGOprotein binding  heart development  
Ontology : EGO-EBIprotein binding  heart development  
NDEx NetworkMEF2BNB
Atlas of Cancer Signalling NetworkMEF2BNB
Wikipedia pathwaysMEF2BNB
Orthology - Evolution
OrthoDB729991
GeneTree (enSembl)ENSG00000064489
Phylogenetic Trees/Animal Genes : TreeFamMEF2BNB
HOVERGENQ96FH0
HOGENOMQ96FH0
Homologs : HomoloGeneMEF2BNB
Homology/Alignments : Family Browser (UCSC)MEF2BNB
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMEF2BNB [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MEF2BNB
dbVarMEF2BNB
ClinVarMEF2BNB
1000_GenomesMEF2BNB 
Exome Variant ServerMEF2BNB
ExAC (Exome Aggregation Consortium)MEF2BNB (select the gene name)
Genetic variants : HAPMAP729991
Genomic Variants (DGV)MEF2BNB [DGVbeta]
DECIPHER (Syndromes)19:19292685-19303400  ENSG00000064489
CONAN: Copy Number AnalysisMEF2BNB 
Mutations
ICGC Data PortalMEF2BNB 
TCGA Data PortalMEF2BNB 
Broad Tumor PortalMEF2BNB
OASIS PortalMEF2BNB [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMEF2BNB  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMEF2BNB
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MEF2BNB
DgiDB (Drug Gene Interaction Database)MEF2BNB
DoCM (Curated mutations)MEF2BNB (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MEF2BNB (select a term)
intoGenMEF2BNB
Cancer3DMEF2BNB(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMEF2BNB
Genetic Testing Registry MEF2BNB
NextProtQ96FH0 [Medical]
TSGene729991
GENETestsMEF2BNB
Huge Navigator MEF2BNB [HugePedia]
snp3D : Map Gene to Disease729991
BioCentury BCIQMEF2BNB
ClinGenMEF2BNB
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD729991
Clinical trialMEF2BNB
Miscellaneous
canSAR (ICR)MEF2BNB (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMEF2BNB
EVEXMEF2BNB
GoPubMedMEF2BNB
iHOPMEF2BNB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:27:59 CET 2017

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