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MEF2C-AS2 (MEF2C antisense RNA 2)

Identity

Alias_symbol (synonym)CTC-467M3.1
Other alias-
HGNC (Hugo) MEF2C-AS2
LocusID (NCBI) 109729137
Atlas_Id 79764
Location 5q14.3  [Link to chromosome band 5q14]
Location_base_pair Starts at 88676218 and ends at 88722831 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MEF2C-AS2   53115
Cards
Entrez_Gene (NCBI)MEF2C-AS2  109729137  MEF2C antisense RNA 2
Aliases
GeneCards (Weizmann)MEF2C-AS2
Ensembl hg19 (Hinxton)ENSG00000245864 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000245864 [Gene_View]  ENSG00000245864 [Sequence]  chr5:88676218-88722831 [Contig_View]  MEF2C-AS2 [Vega]
ICGC DataPortalENSG00000245864
TCGA cBioPortalMEF2C-AS2
AceView (NCBI)MEF2C-AS2
Genatlas (Paris)MEF2C-AS2
WikiGenes109729137
SOURCE (Princeton)MEF2C-AS2
Genetics Home Reference (NIH)MEF2C-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)MEF2C-AS2  -     chr5:88676218-88722831 +  5q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MEF2C-AS2  -     5q14.3   [Description]    (hg19-Feb_2009)
EnsemblMEF2C-AS2 - 5q14.3 [CytoView hg19]  MEF2C-AS2 - 5q14.3 [CytoView hg38]
Mapping of homologs : NCBIMEF2C-AS2 [Mapview hg19]  MEF2C-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA211868
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MEF2C-AS2
Cluster EST : UnigeneHs.598635 [ NCBI ]
CGAP (NCI)Hs.598635
Alternative Splicing GalleryENSG00000245864
Gene ExpressionMEF2C-AS2 [ NCBI-GEO ]   MEF2C-AS2 [ EBI - ARRAY_EXPRESS ]   MEF2C-AS2 [ SEEK ]   MEF2C-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)MEF2C-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)109729137
GTEX Portal (Tissue expression)MEF2C-AS2
Human Protein AtlasENSG00000245864-MEF2C-AS2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MEF2C-AS2
DMDM Disease mutations109729137
Blocks (Seattle)MEF2C-AS2
Human Protein Atlas [tissue]ENSG00000245864-MEF2C-AS2 [tissue]
Protein Interaction databases
FunCoupENSG00000245864
BioGRIDMEF2C-AS2
STRING (EMBL)MEF2C-AS2
ZODIACMEF2C-AS2
Ontologies - Pathways
Huge Navigator MEF2C-AS2 [HugePedia]
snp3D : Map Gene to Disease109729137
BioCentury BCIQMEF2C-AS2
ClinGenMEF2C-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD109729137
Clinical trialMEF2C-AS2
Miscellaneous
canSAR (ICR)MEF2C-AS2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMEF2C-AS2
EVEXMEF2C-AS2
GoPubMedMEF2C-AS2
iHOPMEF2C-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:12:36 CEST 2018

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