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MEGF8 (multiple EGF-like-domains 8)

Identity

Other namesC19orf49
CRPT2
EGFL4
SBP1
HGNC (Hugo) MEGF8
LocusID (NCBI) 1954
Location 19q13.2
Location_base_pair Starts at 42829761 and ends at 42882921 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)MEGF8   3233
Cards
Entrez_Gene (NCBI)MEGF8  1954  multiple EGF-like-domains 8
GeneCards (Weizmann)MEGF8
Ensembl (Hinxton)ENSG00000105429 [Gene_View]  chr19:42829761-42882921 [Contig_View]  MEGF8 [Vega]
AceView (NCBI)MEGF8
Genatlas (Paris)MEGF8
WikiGenes1954
SOURCE (Princeton)NM_001271938 NM_001410 NM_178121
Genomic and cartography
GoldenPath (UCSC)MEGF8  -  19q13.2   chr19:42829761-42882921 +  19q13.2   [Description]    (hg19-Feb_2009)
EnsemblMEGF8 - 19q13.2 [CytoView]
Mapping of homologs : NCBIMEGF8 [Mapview]
OMIM604267   614976   
Gene and transcription
Genbank (Entrez)AB011541 AF497566 AK026018 AY280362 BC033228
RefSeq transcript (Entrez)NM_001271938 NM_001410 NM_178121
RefSeq genomic (Entrez)AC_000151 NC_000019 NC_018930 NG_033030 NT_011109 NW_001838496 NW_004929415
Consensus coding sequences : CCDS (NCBI)MEGF8
Cluster EST : UnigeneHs.132483 [ NCBI ]
CGAP (NCI)Hs.132483
Alternative Splicing : Fast-db (Paris)GSHG0014965
Alternative Splicing GalleryENSG00000105429
Gene ExpressionMEGF8 [ NCBI-GEO ]     MEGF8 [ SEEK ]   MEGF8 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z7M0 (Uniprot)
NextProtQ7Z7M0  [Medical]
With graphics : InterProQ7Z7M0
Splice isoforms : SwissVarQ7Z7M0 (Swissvar)
Domaine pattern : Prosite (Expaxy)ASX_HYDROXYL (PS00010)    CUB (PS01180)    EGF_1 (PS00022)    EGF_2 (PS01186)    EGF_3 (PS50026)    EGF_CA (PS01187)    EGF_LAM_1 (PS01248)    EGF_LAM_2 (PS50027)   
Domains : Interpro (EBI)CUB_dom    EG-like_dom    EGF-like_Ca-bd_dom    EGF-like_CS    EGF-type_Asp/Asn_hydroxyl_site    EGF_Ca-bd_CS    EGF_laminin    Kelch-typ_b-propeller    Plexin-like_fold    Plexin_repeat   
Related proteins : CluSTrQ7Z7M0
Domain families : Pfam (Sanger)CUB (PF00431)    EGF_CA (PF07645)    Laminin_EGF (PF00053)    PSI (PF01437)   
Domain families : Pfam (NCBI)pfam00431    pfam07645    pfam00053    pfam01437   
Domain families : Smart (EMBL)CUB (SM00042)  EGF (SM00181)  EGF_CA (SM00179)  EGF_Lam (SM00180)  PSI (SM00423)  
DMDM Disease mutations1954
Blocks (Seattle)Q7Z7M0
Human Protein AtlasENSG00000105429
Peptide AtlasQ7Z7M0
HPRD10370
IPIIPI00027310   IPI00607580   IPI00791343   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z7M0
IntAct (EBI)Q7Z7M0
FunCoupENSG00000105429
BioGRIDMEGF8
InParanoidQ7Z7M0
Interologous Interaction database Q7Z7M0
IntegromeDBMEGF8
STRING (EMBL)MEGF8
Ontologies - Pathways
Ontology : AmiGOreceptor activity  structural molecule activity  calcium ion binding  protein binding  cellular_component  nucleus  biological_process  integral to membrane  determination of heart left/right asymmetry  determination of digestive tract left/right asymmetry  
Ontology : EGO-EBIreceptor activity  structural molecule activity  calcium ion binding  protein binding  cellular_component  nucleus  biological_process  integral to membrane  determination of heart left/right asymmetry  determination of digestive tract left/right asymmetry  
REACTOMEMEGF8
Protein Interaction DatabaseMEGF8
Wikipedia pathwaysMEGF8
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)MEGF8
SNP (GeneSNP Utah)MEGF8
SNP : HGBaseMEGF8
Genetic variants : HAPMAPMEGF8
1000_GenomesMEGF8 
ICGC programENSG00000105429 
Somatic Mutations in Cancer : COSMICMEGF8 
CONAN: Copy Number AnalysisMEGF8 
Mutations and Diseases : HGMDMEGF8
OMIM604267    614976   
GENETestsMEGF8
Disease Genetic AssociationMEGF8
Huge Navigator MEGF8 [HugePedia]  MEGF8 [HugeCancerGEM]
Genomic VariantsMEGF8  MEGF8 [DGVbeta]
Exome VariantMEGF8
dbVarMEGF8
ClinVarMEGF8
snp3D : Map Gene to Disease1954
General knowledge
Homologs : HomoloGeneMEGF8
Homology/Alignments : Family Browser (UCSC)MEGF8
Phylogenetic Trees/Animal Genes : TreeFamMEGF8
Chemical/Protein Interactions : CTD1954
Chemical/Pharm GKB GenePA27666
Clinical trialMEGF8
Cancer Resource (Charite)ENSG00000105429
Other databases
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
CoreMineMEGF8
iHOPMEGF8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Apr 18 17:09:59 CEST 2014

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