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MEIKIN (meiotic kinetochore factor)

Identity

Other alias-
HGNC (Hugo) MEIKIN
LocusID (NCBI) 728637
Atlas_Id 76792
Location 5q31.1  [Link to chromosome band 5q31]
Location_base_pair Starts at 131806991 and ends at 131945698 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MEIKIN   51253
Cards
Entrez_Gene (NCBI)MEIKIN  728637  meiotic kinetochore factor
Aliases
GeneCards (Weizmann)MEIKIN
Ensembl hg19 (Hinxton)ENSG00000164398 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164398 [Gene_View]  chr5:131806991-131945698 [Contig_View]  MEIKIN [Vega]
ICGC DataPortalENSG00000164398
TCGA cBioPortalMEIKIN
AceView (NCBI)MEIKIN
Genatlas (Paris)MEIKIN
WikiGenes728637
SOURCE (Princeton)MEIKIN
Genetics Home Reference (NIH)MEIKIN
Genomic and cartography
GoldenPath hg38 (UCSC)MEIKIN  -     chr5:131806991-131945698 -  5q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MEIKIN  -     5q31.1   [Description]    (hg19-Feb_2009)
EnsemblMEIKIN - 5q31.1 [CytoView hg19]  MEIKIN - 5q31.1 [CytoView hg38]
Mapping of homologs : NCBIMEIKIN [Mapview hg19]  MEIKIN [Mapview hg38]
OMIM616232   
Gene and transcription
Genbank (Entrez)AB987829 BG181951 DB455285 DY654845 DY655061
RefSeq transcript (Entrez)NM_001278059 NM_001303622
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MEIKIN
Cluster EST : UnigeneHs.631802 [ NCBI ]
CGAP (NCI)Hs.631802
Alternative Splicing GalleryENSG00000164398
Gene ExpressionMEIKIN [ NCBI-GEO ]   MEIKIN [ EBI - ARRAY_EXPRESS ]   MEIKIN [ SEEK ]   MEIKIN [ MEM ]
Gene Expression Viewer (FireBrowse)MEIKIN [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)728637
GTEX Portal (Tissue expression)MEIKIN
Protein : pattern, domain, 3D structure
UniProt/SwissProtA0A087WXM9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA0A087WXM9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA0A087WXM9
Splice isoforms : SwissVarA0A087WXM9
PhosPhoSitePlusA0A087WXM9
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MEIKIN
DMDM Disease mutations728637
Blocks (Seattle)MEIKIN
SuperfamilyA0A087WXM9
Human Protein AtlasENSG00000164398
Peptide AtlasA0A087WXM9
IPIIPI00888865   
Protein Interaction databases
DIP (DOE-UCLA)A0A087WXM9
IntAct (EBI)A0A087WXM9
FunCoupENSG00000164398
BioGRIDMEIKIN
STRING (EMBL)MEIKIN
ZODIACMEIKIN
Ontologies - Pathways
QuickGOA0A087WXM9
Ontology : AmiGOcondensed chromosome kinetochore  condensed nuclear chromosome, centromeric region  male meiosis chromosome segregation  meiotic sister chromatid cohesion involved in meiosis I  female meiosis chromosome segregation  homologous chromosome segregation  meiotic sister chromatid cohesion, centromeric  
Ontology : EGO-EBIcondensed chromosome kinetochore  condensed nuclear chromosome, centromeric region  male meiosis chromosome segregation  meiotic sister chromatid cohesion involved in meiosis I  female meiosis chromosome segregation  homologous chromosome segregation  meiotic sister chromatid cohesion, centromeric  
NDEx NetworkMEIKIN
Atlas of Cancer Signalling NetworkMEIKIN
Wikipedia pathwaysMEIKIN
Orthology - Evolution
OrthoDB728637
GeneTree (enSembl)ENSG00000164398
Phylogenetic Trees/Animal Genes : TreeFamMEIKIN
HOVERGENA0A087WXM9
HOGENOMA0A087WXM9
Homologs : HomoloGeneMEIKIN
Homology/Alignments : Family Browser (UCSC)MEIKIN
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMEIKIN [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MEIKIN
dbVarMEIKIN
ClinVarMEIKIN
1000_GenomesMEIKIN 
Exome Variant ServerMEIKIN
ExAC (Exome Aggregation Consortium)MEIKIN (select the gene name)
Genetic variants : HAPMAP728637
Genomic Variants (DGV)MEIKIN [DGVbeta]
DECIPHERMEIKIN [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMEIKIN 
Mutations
ICGC Data PortalMEIKIN 
TCGA Data PortalMEIKIN 
Broad Tumor PortalMEIKIN
OASIS PortalMEIKIN [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMEIKIN
BioMutasearch MEIKIN
DgiDB (Drug Gene Interaction Database)MEIKIN
DoCM (Curated mutations)MEIKIN (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MEIKIN (select a term)
intoGenMEIKIN
Cancer3DMEIKIN(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616232   
Orphanet
MedgenMEIKIN
Genetic Testing Registry MEIKIN
NextProtA0A087WXM9 [Medical]
TSGene728637
GENETestsMEIKIN
Target ValidationMEIKIN
Huge Navigator MEIKIN [HugePedia]
snp3D : Map Gene to Disease728637
BioCentury BCIQMEIKIN
ClinGenMEIKIN
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728637
Clinical trialMEIKIN
Miscellaneous
canSAR (ICR)MEIKIN (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMEIKIN
EVEXMEIKIN
GoPubMedMEIKIN
iHOPMEIKIN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:27:10 CEST 2017

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