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MEIOC (meiosis specific with coiled-coil domain)

Identity

Alias_namesC17orf104
chromosome 17 open reading frame 104
Alias_symbol (synonym)FLJ35848
Other alias
HGNC (Hugo) MEIOC
LocusID (NCBI) 284071
Atlas_Id 56593
Location 17q21.31  [Link to chromosome band 17q21]
Location_base_pair Starts at 44656394 and ends at 44675797 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MEIOC   26670
Cards
Entrez_Gene (NCBI)MEIOC  284071  meiosis specific with coiled-coil domain
AliasesC17orf104
GeneCards (Weizmann)MEIOC
Ensembl hg19 (Hinxton)ENSG00000180336 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000180336 [Gene_View]  chr17:44656394-44675797 [Contig_View]  MEIOC [Vega]
ICGC DataPortalENSG00000180336
TCGA cBioPortalMEIOC
AceView (NCBI)MEIOC
Genatlas (Paris)MEIOC
WikiGenes284071
SOURCE (Princeton)MEIOC
Genetics Home Reference (NIH)MEIOC
Genomic and cartography
GoldenPath hg38 (UCSC)MEIOC  -     chr17:44656394-44675797 +  17q21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MEIOC  -     17q21.31   [Description]    (hg19-Feb_2009)
EnsemblMEIOC - 17q21.31 [CytoView hg19]  MEIOC - 17q21.31 [CytoView hg38]
Mapping of homologs : NCBIMEIOC [Mapview hg19]  MEIOC [Mapview hg38]
OMIM616934   
Gene and transcription
Genbank (Entrez)AA205120 AK093167 AK097747 AK302001 BC035159
RefSeq transcript (Entrez)NM_001033659 NM_001145080
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MEIOC
Cluster EST : UnigeneHs.349758 [ NCBI ]
CGAP (NCI)Hs.349758
Alternative Splicing GalleryENSG00000180336
Gene ExpressionMEIOC [ NCBI-GEO ]   MEIOC [ EBI - ARRAY_EXPRESS ]   MEIOC [ SEEK ]   MEIOC [ MEM ]
Gene Expression Viewer (FireBrowse)MEIOC [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284071
GTEX Portal (Tissue expression)MEIOC
Protein : pattern, domain, 3D structure
UniProt/SwissProtA2RUB1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA2RUB1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA2RUB1
Splice isoforms : SwissVarA2RUB1
PhosPhoSitePlusA2RUB1
Domaine pattern : Prosite (Expaxy)PHOSPHOPANTETHEINE (PS00012)   
Domains : Interpro (EBI)MEIOC   
Domain families : Pfam (Sanger)MEIOC (PF15189)   
Domain families : Pfam (NCBI)pfam15189   
Conserved Domain (NCBI)MEIOC
DMDM Disease mutations284071
Blocks (Seattle)MEIOC
SuperfamilyA2RUB1
Human Protein AtlasENSG00000180336
Peptide AtlasA2RUB1
HPRD18768
IPIIPI00744856   IPI00173449   IPI00917217   IPI00917572   IPI01011702   IPI00917822   
Protein Interaction databases
DIP (DOE-UCLA)A2RUB1
IntAct (EBI)A2RUB1
FunCoupENSG00000180336
BioGRIDMEIOC
STRING (EMBL)MEIOC
ZODIACMEIOC
Ontologies - Pathways
QuickGOA2RUB1
Ontology : AmiGOcytoplasm  double-strand break repair  synaptonemal complex assembly  male meiosis I  female meiosis I  spermatogenesis  mRNA stabilization  oocyte development  metaphase plate congression  
Ontology : EGO-EBIcytoplasm  double-strand break repair  synaptonemal complex assembly  male meiosis I  female meiosis I  spermatogenesis  mRNA stabilization  oocyte development  metaphase plate congression  
NDEx NetworkMEIOC
Atlas of Cancer Signalling NetworkMEIOC
Wikipedia pathwaysMEIOC
Orthology - Evolution
OrthoDB284071
GeneTree (enSembl)ENSG00000180336
Phylogenetic Trees/Animal Genes : TreeFamMEIOC
HOVERGENA2RUB1
HOGENOMA2RUB1
Homologs : HomoloGeneMEIOC
Homology/Alignments : Family Browser (UCSC)MEIOC
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMEIOC [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MEIOC
dbVarMEIOC
ClinVarMEIOC
1000_GenomesMEIOC 
Exome Variant ServerMEIOC
ExAC (Exome Aggregation Consortium)MEIOC (select the gene name)
Genetic variants : HAPMAP284071
Genomic Variants (DGV)MEIOC [DGVbeta]
DECIPHERMEIOC [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMEIOC 
Mutations
ICGC Data PortalMEIOC 
TCGA Data PortalMEIOC 
Broad Tumor PortalMEIOC
OASIS PortalMEIOC [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMEIOC
BioMutasearch MEIOC
DgiDB (Drug Gene Interaction Database)MEIOC
DoCM (Curated mutations)MEIOC (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MEIOC (select a term)
intoGenMEIOC
Cancer3DMEIOC(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616934   
Orphanet
MedgenMEIOC
Genetic Testing Registry MEIOC
NextProtA2RUB1 [Medical]
TSGene284071
GENETestsMEIOC
Target ValidationMEIOC
Huge Navigator MEIOC [HugePedia]
snp3D : Map Gene to Disease284071
BioCentury BCIQMEIOC
ClinGenMEIOC
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284071
Chemical/Pharm GKB GenePA165431498
Clinical trialMEIOC
Miscellaneous
canSAR (ICR)MEIOC (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMEIOC
EVEXMEIOC
GoPubMedMEIOC
iHOPMEIOC
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:17:43 CEST 2017

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