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MEIS3P2 (Meis homeobox 3 pseudogene 2)

Identity

Alias_namesMeis1 homolog 3 (mouse) pseudogene 2
Other alias-
HGNC (Hugo) MEIS3P2
LocusID (NCBI) 257468
Atlas_Id 68902
Location 17p11.2  [Link to chromosome band 17p11]
Location_base_pair Starts at 20589058 and ends at 20590700 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)MEIS3P2   17638
Cards
Entrez_Gene (NCBI)MEIS3P2  257468  Meis homeobox 3 pseudogene 2
Aliases
GeneCards (Weizmann)MEIS3P2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:20589058-20590700 [Contig_View]  MEIS3P2 [Vega]
TCGA cBioPortalMEIS3P2
AceView (NCBI)MEIS3P2
Genatlas (Paris)MEIS3P2
WikiGenes257468
SOURCE (Princeton)MEIS3P2
Genetics Home Reference (NIH)MEIS3P2
Genomic and cartography
GoldenPath hg38 (UCSC)MEIS3P2  -     chr17:20589058-20590700 +  17p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MEIS3P2  -     17p11.2   [Description]    (hg19-Feb_2009)
EnsemblMEIS3P2 - 17p11.2 [CytoView hg19]  MEIS3P2 - 17p11.2 [CytoView hg38]
Mapping of homologs : NCBIMEIS3P2 [Mapview hg19]  MEIS3P2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK289643
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MEIS3P2
Cluster EST : UnigeneHs.462484 [ NCBI ]
CGAP (NCI)Hs.462484
Gene ExpressionMEIS3P2 [ NCBI-GEO ]   MEIS3P2 [ EBI - ARRAY_EXPRESS ]   MEIS3P2 [ SEEK ]   MEIS3P2 [ MEM ]
Gene Expression Viewer (FireBrowse)MEIS3P2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)257468
GTEX Portal (Tissue expression)MEIS3P2
Protein : pattern, domain, 3D structure
UniProt/SwissProtA8K0S8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA8K0S8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA8K0S8
Splice isoforms : SwissVarA8K0S8
PhosPhoSitePlusA8K0S8
Domaine pattern : Prosite (Expaxy)HOMEOBOX_2 (PS50071)   
Domains : Interpro (EBI)Homeobox-like    Homeobox_dom    Homeobox_KN_domain    PKNOX/Meis_N   
Domain families : Pfam (Sanger)Homeobox_KN (PF05920)    Meis_PKNOX_N (PF16493)   
Domain families : Pfam (NCBI)pfam05920    pfam16493   
Domain families : Smart (EMBL)HOX (SM00389)  
Conserved Domain (NCBI)MEIS3P2
DMDM Disease mutations257468
Blocks (Seattle)MEIS3P2
SuperfamilyA8K0S8
Peptide AtlasA8K0S8
IPIIPI00411957   
Protein Interaction databases
DIP (DOE-UCLA)A8K0S8
IntAct (EBI)A8K0S8
BioGRIDMEIS3P2
STRING (EMBL)MEIS3P2
ZODIACMEIS3P2
Ontologies - Pathways
QuickGOA8K0S8
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkMEIS3P2
Atlas of Cancer Signalling NetworkMEIS3P2
Wikipedia pathwaysMEIS3P2
Orthology - Evolution
OrthoDB257468
Phylogenetic Trees/Animal Genes : TreeFamMEIS3P2
HOVERGENA8K0S8
HOGENOMA8K0S8
Homologs : HomoloGeneMEIS3P2
Homology/Alignments : Family Browser (UCSC)MEIS3P2
Gene fusions - Rearrangements
Fusion: Tumor Portal MEIS3P2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMEIS3P2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MEIS3P2
dbVarMEIS3P2
ClinVarMEIS3P2
1000_GenomesMEIS3P2 
Exome Variant ServerMEIS3P2
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP257468
Genomic Variants (DGV)MEIS3P2 [DGVbeta]
DECIPHERMEIS3P2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMEIS3P2 
Mutations
ICGC Data PortalMEIS3P2 
TCGA Data PortalMEIS3P2 
Broad Tumor PortalMEIS3P2
OASIS PortalMEIS3P2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMEIS3P2
BioMutasearch MEIS3P2
DgiDB (Drug Gene Interaction Database)MEIS3P2
DoCM (Curated mutations)MEIS3P2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MEIS3P2 (select a term)
intoGenMEIS3P2
Cancer3DMEIS3P2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMEIS3P2
Genetic Testing Registry MEIS3P2
NextProtA8K0S8 [Medical]
TSGene257468
GENETestsMEIS3P2
Target ValidationMEIS3P2
Huge Navigator MEIS3P2 [HugePedia]
snp3D : Map Gene to Disease257468
BioCentury BCIQMEIS3P2
ClinGenMEIS3P2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD257468
Chemical/Pharm GKB GenePA142671467
Clinical trialMEIS3P2
Miscellaneous
canSAR (ICR)MEIS3P2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMEIS3P2
EVEXMEIS3P2
GoPubMedMEIS3P2
iHOPMEIS3P2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:12:32 CET 2017

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