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MELTF (melanotransferrin)

Identity

Alias_namesMFI2
antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5
Alias_symbol (synonym)CD228
FLJ38863
MAP97
MGC4856
MTF1
MTf
Other alias
HGNC (Hugo) MELTF
LocusID (NCBI) 4241
Atlas_Id 55648
Location 3q29  [Link to chromosome band 3q29]
Location_base_pair Starts at 197001741 and ends at 197029816 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MELTF (3q29) / DVL1 (1p36.33)MELTF (3q29) / IGSF11 (3q13.32)MELTF (3q29) / MELTF (3q29)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MELTF   7037
Cards
Entrez_Gene (NCBI)MELTF  4241  melanotransferrin
AliasesCD228; MAP97; MFI2; MTF1; 
MTf
GeneCards (Weizmann)MELTF
Ensembl hg19 (Hinxton)ENSG00000163975 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163975 [Gene_View]  chr3:197001741-197029816 [Contig_View]  MELTF [Vega]
ICGC DataPortalENSG00000163975
TCGA cBioPortalMELTF
AceView (NCBI)MELTF
Genatlas (Paris)MELTF
WikiGenes4241
SOURCE (Princeton)MELTF
Genetics Home Reference (NIH)MELTF
Genomic and cartography
GoldenPath hg38 (UCSC)MELTF  -     chr3:197001741-197029816 -  3q29   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MELTF  -     3q29   [Description]    (hg19-Feb_2009)
EnsemblMELTF - 3q29 [CytoView hg19]  MELTF - 3q29 [CytoView hg38]
Mapping of homologs : NCBIMELTF [Mapview hg19]  MELTF [Mapview hg38]
OMIM155750   
Gene and transcription
Genbank (Entrez)A00127 AA442552 AH002920 AK096182 AU099352
RefSeq transcript (Entrez)NM_005929 NM_033316
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MELTF
Cluster EST : UnigeneHs.184727 [ NCBI ]
CGAP (NCI)Hs.184727
Alternative Splicing GalleryENSG00000163975
Gene ExpressionMELTF [ NCBI-GEO ]   MELTF [ EBI - ARRAY_EXPRESS ]   MELTF [ SEEK ]   MELTF [ MEM ]
Gene Expression Viewer (FireBrowse)MELTF [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4241
GTEX Portal (Tissue expression)MELTF
Human Protein AtlasENSG00000163975-MELTF [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP08582   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP08582  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP08582
Splice isoforms : SwisˇVar>/TD>P08582
PhosPhoSitePlusP08582
Domaine pattern : Prosite (Expaxy)TRANSFERRIN_LIKE_1 (PS00205)    TRANSFERRIN_LIKE_2 (PS00206)    TRANSFERRIN_LIKE_3 (PS00207)    TRANSFERRIN_LIKE_4 (PS51408)   
Domains : Interpro (EBI)Transferrin    Transferrin-like_dom    Transferrin_Fe_BS   
Domain families : Pfam (Sanger)Transferrin (PF00405)   
Domain families : Pfam (NCBI)pfam00405   
Domain families : Smart (EMBL)TR_FER (SM00094)  
Conserved Domain (NCBI)MELTF
DMDM Disease mutations4241
Blocks (Seattle)MELTF
SuperfamilyP08582
Human Protein Atlas [tissue]ENSG00000163975-MELTF [tissue]
Peptide AtlasP08582
HPRD01122
IPIIPI00029275   IPI00218301   IPI00926464   
Protein Interaction databases
P08582
IntAct (EBI)P08582
FunCoupENSG00000163975
BioGRIDMELTF
STRING (EMBL)MELTF
ZODIACMELTF
Ontologies - Pathways
QuickGOP08582
Ontology : AmiGOregulation of cell growth  iron ion binding  protein binding  extracellular region  extracellular space  plasma membrane  integral component of plasma membrane  C-terminal protein lipidation  cell surface  positive regulation of plasminogen activation  regulation of cell proliferation  anchored component of plasma membrane  iron ion homeostasis  extracellular exosome  positive regulation of extracellular matrix disassembly  iron ion import  negative regulation of substrate adhesion-dependent cell spreading  
Ontology : EGO-EBIregulation of cell growth  iron ion binding  protein binding  extracellular region  extracellular space  plasma membrane  integral component of plasma membrane  C-terminal protein lipidation  cell surface  positive regulation of plasminogen activation  regulation of cell proliferation  anchored component of plasma membrane  iron ion homeostasis  extracellular exosome  positive regulation of extracellular matrix disassembly  iron ion import  negative regulation of substrate adhesion-dependent cell spreading  
NDEx NetworkMELTF
Atlas of Cancer Signalling NetworkMELTF
Wikipedia pathwaysMELTF
Orthology - Evolution
OrthoDB4241
GeneTree (enSembl)ENSG00000163975
Phylogenetic Trees/Animal Genes : TreeFamMELTF
HOVERGENP08582
HOGENOMP08582
Homologs : HomoloGeneMELTF
Homology/Alignments : Family Browser (UCSC)MELTF
Gene fusions - Rearrangements
Tumor Fusion PortalMELTF
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMELTF [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MELTF
dbVarMELTF
ClinVarMELTF
1000_GenomesMELTF 
Exome Variant ServerMELTF
ExAC (Exome Aggregation Consortium)ENSG00000163975
GNOMAD BrowserENSG00000163975
Genetic variants : HAPMAP4241
Genomic Variants (DGV)MELTF [DGVbeta]
DECIPHERMELTF [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMELTF 
Mutations
ICGC Data PortalMELTF 
TCGA Data PortalMELTF 
Broad Tumor PortalMELTF
OASIS PortalMELTF [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMELTF
BioMutasearch MELTF
DgiDB (Drug Gene Interaction Database)MELTF
DoCM (Curated mutations)MELTF (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MELTF (select a term)
intoGenMELTF
Cancer3DMELTF(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM155750   
Orphanet
DisGeNETMELTF
MedgenMELTF
Genetic Testing Registry MELTF
NextProtP08582 [Medical]
TSGene4241
GENETestsMELTF
Target ValidationMELTF
Huge Navigator MELTF [HugePedia]
snp3D : Map Gene to Disease4241
BioCentury BCIQMELTF
ClinGenMELTF
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4241
Chemical/Pharm GKB GenePA30774
Clinical trialMELTF
Miscellaneous
canSAR (ICR)MELTF (select the gene name)
Probes
Litterature
PubMed47 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMELTF
EVEXMELTF
GoPubMedMELTF
iHOPMELTF
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:22:07 CET 2017

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