Atlas of Genetics and Cytogenetics in Oncology and Haematology

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MEOX2 (mesenchyme homeobox 2)

Identity

Other namesGAX
MOX2
HGNC (Hugo) MEOX2
LocusID (NCBI) 4223
Location 7p21.2
Location_base_pair Starts at 15650837 and ends at 15726308 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)MEOX2   7014
Entrez_Gene (NCBI)MEOX2  4223  mesenchyme homeobox 2
Cards
GeneCards (Weizmann)MEOX2
Ensembl (Hinxton)ENSG00000106511 [Gene_View]  chr7:15650837-15726308 [Contig_View]  MEOX2 [Vega]
AceView (NCBI)MEOX2
Genatlas (Paris)MEOX2
SOURCE (Stanford)NM_005924
Genomic and cartography
GoldenPath (UCSC)MEOX2  -  7p21.2   chr7:15650837-15726308 -  7p21.2   [Description]    (hg19-Feb_2009)
EnsemblMEOX2 - 7p21.2 [CytoView]
Mapping of homologs : NCBIMEOX2 [Mapview]
OMIM600535   
Gene and transcription
Genbank (Entrez)AK309472 AK313386 BC017021 BQ025060 CR536553
RefSeq transcript (SRS)NM_005924
RefSeq transcript (Entrez)NM_005924
RefSeq genomic (SRS)AC_000068 AC_000139 NC_000007 NC_018918 NG_032988 NT_007819 NT_079592 NW_001839003 NW_004078029
RefSeq genomic (Entrez)AC_000068 AC_000139 NC_000007 NC_018918 NG_032988 NT_007819 NT_079592 NW_001839003 NW_004078029
Consensus coding sequences : CCDS (NCBI)MEOX2
Cluster EST : UnigeneHs.170355 [ SRS ] Hs.170355 [ NCBI ]
CGAP (NCI)Hs.170355
Alternative Splicing : Fast-db (Paris)GSHG0028022
Alternative Splicing GalleryENSG00000106511
Gene ExpressionMEOX2 [ NCBI-GEO ]   MEOX2 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP50222 (SRS) P50222 (Uniprot)
NextProtP50222
With graphics : InterProP50222
Splice isoforms : SwissVarP50222(Swissvar)
Domaine pattern : Prosite (SRS)HOMEOBOX_1 (PS00027)    HOMEOBOX_2 (PS50071)   
Domaine pattern : Prosite (Expaxy)HOMEOBOX_1 (PS00027)    HOMEOBOX_2 (PS50071)   
Domains : Interpro (SRS)Homeobox_CS    Homeobox_metazoa    Homeodomain    Homeodomain-like   
Domains : Interpro (EBI)Homeobox_CS    Homeobox_metazoa    Homeodomain    Homeodomain-like   
Related proteins : CluSTrP50222
Domain families : Pfam (SRS)Homeobox (PF00046)   
Domain families : Pfam (Sanger)Homeobox (PF00046)   
Domain families : Pfam (NCBI)pfam00046   
Domain families : Smart (EMBL)HOX (SM00389)  
DMDM4223
Blocks (Seattle)P50222
Human Protein AtlasENSG00000106511
HPRD02760
IPIIPI00030729   
Protein Interaction databases
DIP (DOE-UCLA)P50222
IntAct (EBI)P50222
FunCoupENSG00000106511
REACTOMEMEOX2
Protein Interaction Database4223
BioGRIDMEOX2
InParanoidP50222
Interologous Interaction database P50222
IntegromeDBMEOX2
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)MEOX2
SNP (GeneSNP Utah)MEOX2
SNP : HGBaseMEOX2
Genetic variants : HAPMAPMEOX2
Somatic Mutations in Cancer : COSMICMEOX2 
CONAN: Copy Number AnalysisMEOX2 
Mutations and Diseases : HGMDMEOX2
OMIM600535   
GENETests600535   
Disease Genetic AssociationMEOX2
Huge Navigator MEOX2 [HugePedia]  MEOX2 [HugeCancerGEM]
Genomic VariantsMEOX2  MEOX2 [DGVbeta]
snp3D : Map Gene to Disease4223
General knowledge
Homologs : HomoloGeneMEOX2
Homology/Alignments : Family Browser (UCSC)MEOX2
Phylogenetic Trees/Animal Genes : TreeFamMEOX2
Chemical/Protein Interactions : CTD4223
Chemical/Pharm GKB GenePA30748
Clinical trialMEOX2
Cancer Resource (Charite)ENSG00000106511
Ontology : AmiGOangiogenesis  somite specification  sequence-specific DNA binding transcription factor activity  protein binding  cytoplasm  multicellular organismal development  skeletal muscle tissue development  blood circulation  nuclear speck  sequence-specific DNA binding  palate development  limb development  
Ontology : EGO-EBIangiogenesis  somite specification  sequence-specific DNA binding transcription factor activity  protein binding  cytoplasm  multicellular organismal development  skeletal muscle tissue development  blood circulation  nuclear speck  sequence-specific DNA binding  palate development  limb development  
Other databases
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
PubGeneMEOX2
iHOPMEOX2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:25:15 CEST 2013
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