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MEOX2 (mesenchyme homeobox 2)

Identity

Other namesGAX
MOX2
HGNC (Hugo) MEOX2
LocusID (NCBI) 4223
Location 7p21.2
Location_base_pair Starts at 15650837 and ends at 15726308 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)MEOX2   7014
Cards
Entrez_Gene (NCBI)MEOX2  4223  mesenchyme homeobox 2
GeneCards (Weizmann)MEOX2
Ensembl (Hinxton)ENSG00000106511 [Gene_View]  chr7:15650837-15726308 [Contig_View]  MEOX2 [Vega]
ICGC DataPortalENSG00000106511
cBioPortalMEOX2
AceView (NCBI)MEOX2
Genatlas (Paris)MEOX2
WikiGenes4223
SOURCE (Princeton)NM_005924
Genomic and cartography
GoldenPath (UCSC)MEOX2  -  7p21.2   chr7:15650837-15726308 -  7p21.2   [Description]    (hg19-Feb_2009)
EnsemblMEOX2 - 7p21.2 [CytoView]
Mapping of homologs : NCBIMEOX2 [Mapview]
OMIM600535   
Gene and transcription
Genbank (Entrez)AK309472 AK313386 BC017021 BQ025060 CR536553
RefSeq transcript (Entrez)NM_005924
RefSeq genomic (Entrez)AC_000139 NC_000007 NC_018918 NG_032988 NT_007819 NW_001839003 NW_004929329
Consensus coding sequences : CCDS (NCBI)MEOX2
Cluster EST : UnigeneHs.170355 [ NCBI ]
CGAP (NCI)Hs.170355
Alternative Splicing : Fast-db (Paris)GSHG0028022
Alternative Splicing GalleryENSG00000106511
Gene ExpressionMEOX2 [ NCBI-GEO ]     MEOX2 [ SEEK ]   MEOX2 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP50222 (Uniprot)
NextProtP50222  [Medical]
With graphics : InterProP50222
Splice isoforms : SwissVarP50222 (Swissvar)
Domaine pattern : Prosite (Expaxy)HOMEOBOX_1 (PS00027)    HOMEOBOX_2 (PS50071)   
Domains : Interpro (EBI)Homeobox_CS [organisation]   Homeobox_dom [organisation]   Homeobox_metazoa [organisation]   Homeodomain-like [organisation]  
Related proteins : CluSTrP50222
Domain families : Pfam (Sanger)Homeobox (PF00046)   
Domain families : Pfam (NCBI)pfam00046   
Domain families : Smart (EMBL)HOX (SM00389)  
DMDM Disease mutations4223
Blocks (Seattle)P50222
Human Protein AtlasENSG00000106511 [gene] [tissue] [antibody] [cell] [cancer]
Peptide AtlasP50222
HPRD02760
IPIIPI00030729   
Protein Interaction databases
DIP (DOE-UCLA)P50222
IntAct (EBI)P50222
FunCoupENSG00000106511
BioGRIDMEOX2
InParanoidP50222
Interologous Interaction database P50222
IntegromeDBMEOX2
STRING (EMBL)MEOX2
Ontologies - Pathways
Ontology : AmiGORNA polymerase II core promoter proximal region sequence-specific DNA binding  RNA polymerase II distal enhancer sequence-specific DNA binding  RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription  RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription  RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription  RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription  angiogenesis  somite specification  protein binding  cytoplasm  multicellular organismal development  skeletal muscle tissue development  blood circulation  nuclear speck  sequence-specific DNA binding  positive regulation of transcription from RNA polymerase II promoter  positive regulation of transcription from RNA polymerase II promoter  palate development  limb development  neuron death  
Ontology : EGO-EBIRNA polymerase II core promoter proximal region sequence-specific DNA binding  RNA polymerase II distal enhancer sequence-specific DNA binding  RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription  RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription  RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription  RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription  angiogenesis  somite specification  protein binding  cytoplasm  multicellular organismal development  skeletal muscle tissue development  blood circulation  nuclear speck  sequence-specific DNA binding  positive regulation of transcription from RNA polymerase II promoter  positive regulation of transcription from RNA polymerase II promoter  palate development  limb development  neuron death  
Protein Interaction DatabaseMEOX2
Wikipedia pathwaysMEOX2
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)MEOX2
snp3D : Map Gene to Disease4223
SNP (GeneSNP Utah)MEOX2
SNP : HGBaseMEOX2
Genetic variants : HAPMAPMEOX2
Exome VariantMEOX2
1000_GenomesMEOX2 
ICGC programENSG00000106511 
Somatic Mutations in Cancer : COSMICMEOX2 
CONAN: Copy Number AnalysisMEOX2 
Mutations and Diseases : HGMDMEOX2
Mutations and Diseases : intOGenMEOX2
Genomic VariantsMEOX2  MEOX2 [DGVbeta]
dbVarMEOX2
ClinVarMEOX2
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM600535   
MedgenMEOX2
GENETestsMEOX2
Disease Genetic AssociationMEOX2
Huge Navigator MEOX2 [HugePedia]  MEOX2 [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneMEOX2
Homology/Alignments : Family Browser (UCSC)MEOX2
Phylogenetic Trees/Animal Genes : TreeFamMEOX2
Chemical/Protein Interactions : CTD4223
Chemical/Pharm GKB GenePA30748
Clinical trialMEOX2
Cancer Resource (Charite)ENSG00000106511
Other databases
Probes
Litterature
PubMed27 Pubmed reference(s) in Entrez
CoreMineMEOX2
iHOPMEOX2
OncoSearchMEOX2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Aug 26 16:54:52 CEST 2014

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