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METTL10 (methyltransferase like 10)

Identity

Alias_namesC10orf138
chromosome 10 open reading frame 138
Alias_symbol (synonym)Em:AC068896.3
Other alias
HGNC (Hugo) METTL10
LocusID (NCBI) 399818
Atlas_Id 68909
Location 10q26.13  [Link to chromosome band 10q26]
Location_base_pair Starts at 126446400 and ends at 126480510 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
METTL10 (10q26.13) / FAM53B (10q26.13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)METTL10   33787
Cards
Entrez_Gene (NCBI)METTL10  399818  methyltransferase like 10
AliasesC10orf138
GeneCards (Weizmann)METTL10
Ensembl hg19 (Hinxton) [Gene_View]  chr10:126446400-126480510 [Contig_View]  METTL10 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:126446400-126480510 [Contig_View]  METTL10 [Vega]
TCGA cBioPortalMETTL10
AceView (NCBI)METTL10
Genatlas (Paris)METTL10
WikiGenes399818
SOURCE (Princeton)METTL10
Genetics Home Reference (NIH)METTL10
Genomic and cartography
GoldenPath hg19 (UCSC)METTL10  -     chr10:126446400-126480510 -  10q26.13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)METTL10  -     10q26.13   [Description]    (hg38-Dec_2013)
EnsemblMETTL10 - 10q26.13 [CytoView hg19]  METTL10 - 10q26.13 [CytoView hg38]
Mapping of homologs : NCBIMETTL10 [Mapview hg19]  METTL10 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA776892 AF318345 AK022354 AL832292 BC026167
RefSeq transcript (Entrez)NM_001304467 NM_001304468 NM_212554
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_030059 NW_004929376
Consensus coding sequences : CCDS (NCBI)METTL10
Cluster EST : UnigeneHs.741365 [ NCBI ]
CGAP (NCI)Hs.741365
Gene ExpressionMETTL10 [ NCBI-GEO ]   METTL10 [ EBI - ARRAY_EXPRESS ]   METTL10 [ SEEK ]   METTL10 [ MEM ]
Gene Expression Viewer (FireBrowse)METTL10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)399818
GTEX Portal (Tissue expression)METTL10
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5JPI9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5JPI9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5JPI9
Splice isoforms : SwissVarQ5JPI9
PhosPhoSitePlusQ5JPI9
Domains : Interpro (EBI)Methyltranfer_dom    SAM-dependent_MTases    See1-like   
Domain families : Pfam (Sanger)Methyltransf_31 (PF13847)   
Domain families : Pfam (NCBI)pfam13847   
Conserved Domain (NCBI)METTL10
DMDM Disease mutations399818
Blocks (Seattle)METTL10
SuperfamilyQ5JPI9
Peptide AtlasQ5JPI9
HPRD14216
IPIIPI00887206   IPI00871222   IPI00383305   IPI01025226   
Protein Interaction databases
DIP (DOE-UCLA)Q5JPI9
IntAct (EBI)Q5JPI9
BioGRIDMETTL10
STRING (EMBL)METTL10
ZODIACMETTL10
Ontologies - Pathways
QuickGOQ5JPI9
Ontology : AmiGOcytoplasm  methyltransferase activity  methylation  
Ontology : EGO-EBIcytoplasm  methyltransferase activity  methylation  
NDEx NetworkMETTL10
Atlas of Cancer Signalling NetworkMETTL10
Wikipedia pathwaysMETTL10
Orthology - Evolution
OrthoDB399818
Phylogenetic Trees/Animal Genes : TreeFamMETTL10
HOVERGENQ5JPI9
HOGENOMQ5JPI9
Homologs : HomoloGeneMETTL10
Homology/Alignments : Family Browser (UCSC)METTL10
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMETTL10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)METTL10
dbVarMETTL10
ClinVarMETTL10
1000_GenomesMETTL10 
Exome Variant ServerMETTL10
ExAC (Exome Aggregation Consortium)METTL10 (select the gene name)
Genetic variants : HAPMAP399818
Genomic Variants (DGV)METTL10 [DGVbeta]
DECIPHER (Syndromes)10:126446400-126480510  
CONAN: Copy Number AnalysisMETTL10 
Mutations
ICGC Data PortalMETTL10 
TCGA Data PortalMETTL10 
Broad Tumor PortalMETTL10
OASIS PortalMETTL10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMETTL10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMETTL10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch METTL10
DgiDB (Drug Gene Interaction Database)METTL10
DoCM (Curated mutations)METTL10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)METTL10 (select a term)
intoGenMETTL10
Cancer3DMETTL10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMETTL10
Genetic Testing Registry METTL10
NextProtQ5JPI9 [Medical]
TSGene399818
GENETestsMETTL10
Huge Navigator METTL10 [HugePedia]
snp3D : Map Gene to Disease399818
BioCentury BCIQMETTL10
ClinGenMETTL10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD399818
Chemical/Pharm GKB GenePA162395769
Clinical trialMETTL10
Miscellaneous
canSAR (ICR)METTL10 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMETTL10
EVEXMETTL10
GoPubMedMETTL10
iHOPMETTL10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:28:04 CET 2017

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