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METTL11B (methyltransferase like 11B)

Identity

Alias_namesC1orf184
chromosome 1 open reading frame 184
Alias_symbol (synonym)HOMT1B
Other aliasNTM1B
HGNC (Hugo) METTL11B
LocusID (NCBI) 149281
Atlas_Id 68910
Location 1q24.2  [Link to chromosome band 1q24]
Location_base_pair Starts at 170115188 and ends at 170136923 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)METTL11B   31932
Cards
Entrez_Gene (NCBI)METTL11B  149281  methyltransferase like 11B
AliasesC1orf184; HOMT1B; NTM1B
GeneCards (Weizmann)METTL11B
Ensembl hg19 (Hinxton)ENSG00000203740 [Gene_View]  chr1:170115188-170136923 [Contig_View]  METTL11B [Vega]
Ensembl hg38 (Hinxton)ENSG00000203740 [Gene_View]  chr1:170115188-170136923 [Contig_View]  METTL11B [Vega]
ICGC DataPortalENSG00000203740
TCGA cBioPortalMETTL11B
AceView (NCBI)METTL11B
Genatlas (Paris)METTL11B
WikiGenes149281
SOURCE (Princeton)METTL11B
Genetics Home Reference (NIH)METTL11B
Genomic and cartography
GoldenPath hg19 (UCSC)METTL11B  -     chr1:170115188-170136923 +  1q24.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)METTL11B  -     1q24.2   [Description]    (hg38-Dec_2013)
EnsemblMETTL11B - 1q24.2 [CytoView hg19]  METTL11B - 1q24.2 [CytoView hg38]
Mapping of homologs : NCBIMETTL11B [Mapview hg19]  METTL11B [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC157860 BC171858
RefSeq transcript (Entrez)NM_001136107
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)METTL11B
Cluster EST : UnigeneHs.553612 [ NCBI ]
CGAP (NCI)Hs.553612
Alternative Splicing GalleryENSG00000203740
Gene ExpressionMETTL11B [ NCBI-GEO ]   METTL11B [ EBI - ARRAY_EXPRESS ]   METTL11B [ SEEK ]   METTL11B [ MEM ]
Gene Expression Viewer (FireBrowse)METTL11B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)149281
GTEX Portal (Tissue expression)METTL11B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5VVY1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5VVY1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5VVY1
Splice isoforms : SwissVarQ5VVY1
Catalytic activity : Enzyme2.1.1.299 [ Enzyme-Expasy ]   2.1.1.2992.1.1.299 [ IntEnz-EBI ]   2.1.1.299 [ BRENDA ]   2.1.1.299 [ KEGG ]   
PhosPhoSitePlusQ5VVY1
Domains : Interpro (EBI)MeTrfase_NTM1    SAM-dependent_MTases   
Domain families : Pfam (Sanger)Methyltransf_PK (PF05891)   
Domain families : Pfam (NCBI)pfam05891   
Conserved Domain (NCBI)METTL11B
DMDM Disease mutations149281
Blocks (Seattle)METTL11B
SuperfamilyQ5VVY1
Human Protein AtlasENSG00000203740
Peptide AtlasQ5VVY1
IPIIPI00914531   
Protein Interaction databases
DIP (DOE-UCLA)Q5VVY1
IntAct (EBI)Q5VVY1
FunCoupENSG00000203740
BioGRIDMETTL11B
STRING (EMBL)METTL11B
ZODIACMETTL11B
Ontologies - Pathways
QuickGOQ5VVY1
Ontology : AmiGOnucleus  cytoplasm  N-terminal protein amino acid methylation  N-terminal protein N-methyltransferase activity  
Ontology : EGO-EBInucleus  cytoplasm  N-terminal protein amino acid methylation  N-terminal protein N-methyltransferase activity  
NDEx NetworkMETTL11B
Atlas of Cancer Signalling NetworkMETTL11B
Wikipedia pathwaysMETTL11B
Orthology - Evolution
OrthoDB149281
GeneTree (enSembl)ENSG00000203740
Phylogenetic Trees/Animal Genes : TreeFamMETTL11B
HOVERGENQ5VVY1
HOGENOMQ5VVY1
Homologs : HomoloGeneMETTL11B
Homology/Alignments : Family Browser (UCSC)METTL11B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMETTL11B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)METTL11B
dbVarMETTL11B
ClinVarMETTL11B
1000_GenomesMETTL11B 
Exome Variant ServerMETTL11B
ExAC (Exome Aggregation Consortium)METTL11B (select the gene name)
Genetic variants : HAPMAP149281
Genomic Variants (DGV)METTL11B [DGVbeta]
DECIPHER (Syndromes)1:170115188-170136923  ENSG00000203740
CONAN: Copy Number AnalysisMETTL11B 
Mutations
ICGC Data PortalMETTL11B 
TCGA Data PortalMETTL11B 
Broad Tumor PortalMETTL11B
OASIS PortalMETTL11B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMETTL11B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMETTL11B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch METTL11B
DgiDB (Drug Gene Interaction Database)METTL11B
DoCM (Curated mutations)METTL11B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)METTL11B (select a term)
intoGenMETTL11B
Cancer3DMETTL11B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMETTL11B
Genetic Testing Registry METTL11B
NextProtQ5VVY1 [Medical]
TSGene149281
GENETestsMETTL11B
Huge Navigator METTL11B [HugePedia]
snp3D : Map Gene to Disease149281
BioCentury BCIQMETTL11B
ClinGenMETTL11B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD149281
Chemical/Pharm GKB GenePA162395801
Clinical trialMETTL11B
Miscellaneous
canSAR (ICR)METTL11B (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMETTL11B
EVEXMETTL11B
GoPubMedMETTL11B
iHOPMETTL11B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:28:04 CET 2017

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