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METTL12 (methyltransferase like 12)

Identity

Alias_symbol (synonym)U99HG
Other alias
HGNC (Hugo) METTL12
LocusID (NCBI) 751071
Atlas_Id 68911
Location 11q12.3  [Link to chromosome band 11q12]
Location_base_pair Starts at 62665307 and ends at 62667451 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
METTL12 (11q12.3) / DPF2 (11q13.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)METTL12   33113
Cards
Entrez_Gene (NCBI)METTL12  751071  methyltransferase like 12
AliasesU99HG
GeneCards (Weizmann)METTL12
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:62665307-62667451 [Contig_View]  METTL12 [Vega]
TCGA cBioPortalMETTL12
AceView (NCBI)METTL12
Genatlas (Paris)METTL12
WikiGenes751071
SOURCE (Princeton)METTL12
Genetics Home Reference (NIH)METTL12
Genomic and cartography
GoldenPath hg38 (UCSC)METTL12  -     chr11:62665307-62667451 +  11q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)METTL12  -     11q12.3   [Description]    (hg19-Feb_2009)
EnsemblMETTL12 - 11q12.3 [CytoView hg19]  METTL12 - 11q12.3 [CytoView hg38]
Mapping of homologs : NCBIMETTL12 [Mapview hg19]  METTL12 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK297138 BC041359 BC147001 BC147011 BC171895
RefSeq transcript (Entrez)NM_001043229
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)METTL12
Cluster EST : UnigeneHs.640726 [ NCBI ]
CGAP (NCI)Hs.640726
Gene ExpressionMETTL12 [ NCBI-GEO ]   METTL12 [ EBI - ARRAY_EXPRESS ]   METTL12 [ SEEK ]   METTL12 [ MEM ]
Gene Expression Viewer (FireBrowse)METTL12 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)751071
GTEX Portal (Tissue expression)METTL12
Protein : pattern, domain, 3D structure
UniProt/SwissProtA8MUP2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA8MUP2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA8MUP2
Splice isoforms : SwissVarA8MUP2
Catalytic activity : Enzyme2.1.1.- [ Enzyme-Expasy ]   2.1.1.-2.1.1.- [ IntEnz-EBI ]   2.1.1.- [ BRENDA ]   2.1.1.- [ KEGG ]   
PhosPhoSitePlusA8MUP2
Domains : Interpro (EBI)Methyltranfer_dom    SAM-dependent_MTases   
Domain families : Pfam (Sanger)Methyltransf_31 (PF13847)   
Domain families : Pfam (NCBI)pfam13847   
Conserved Domain (NCBI)METTL12
DMDM Disease mutations751071
Blocks (Seattle)METTL12
SuperfamilyA8MUP2
Peptide AtlasA8MUP2
IPIIPI00785058   
Protein Interaction databases
DIP (DOE-UCLA)A8MUP2
IntAct (EBI)A8MUP2
BioGRIDMETTL12
STRING (EMBL)METTL12
ZODIACMETTL12
Ontologies - Pathways
QuickGOA8MUP2
Ontology : AmiGOmitochondrion  methyltransferase activity  methylation  
Ontology : EGO-EBImitochondrion  methyltransferase activity  methylation  
NDEx NetworkMETTL12
Atlas of Cancer Signalling NetworkMETTL12
Wikipedia pathwaysMETTL12
Orthology - Evolution
OrthoDB751071
Phylogenetic Trees/Animal Genes : TreeFamMETTL12
HOVERGENA8MUP2
HOGENOMA8MUP2
Homologs : HomoloGeneMETTL12
Homology/Alignments : Family Browser (UCSC)METTL12
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMETTL12 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)METTL12
dbVarMETTL12
ClinVarMETTL12
1000_GenomesMETTL12 
Exome Variant ServerMETTL12
ExAC (Exome Aggregation Consortium)METTL12 (select the gene name)
Genetic variants : HAPMAP751071
Genomic Variants (DGV)METTL12 [DGVbeta]
DECIPHERMETTL12 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMETTL12 
Mutations
ICGC Data PortalMETTL12 
TCGA Data PortalMETTL12 
Broad Tumor PortalMETTL12
OASIS PortalMETTL12 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMETTL12  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMETTL12
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch METTL12
DgiDB (Drug Gene Interaction Database)METTL12
DoCM (Curated mutations)METTL12 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)METTL12 (select a term)
intoGenMETTL12
Cancer3DMETTL12(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMETTL12
Genetic Testing Registry METTL12
NextProtA8MUP2 [Medical]
TSGene751071
GENETestsMETTL12
Target ValidationMETTL12
Huge Navigator METTL12 [HugePedia]
snp3D : Map Gene to Disease751071
BioCentury BCIQMETTL12
ClinGenMETTL12
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD751071
Chemical/Pharm GKB GenePA164722245
Clinical trialMETTL12
Miscellaneous
canSAR (ICR)METTL12 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMETTL12
EVEXMETTL12
GoPubMedMETTL12
iHOPMETTL12
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 16:29:30 CEST 2017

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