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METTL18 (methyltransferase like 18)

Identity

Alias_namesC1orf156
chromosome 1 open reading frame 156
Alias_symbol (synonym)MGC9084
AsTP2
HPM1
Other alias
HGNC (Hugo) METTL18
LocusID (NCBI) 92342
Atlas_Id 68915
Location 1q24.2  [Link to chromosome band 1q24]
Location_base_pair Starts at 169792532 and ends at 169794976 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)METTL18   28793
Cards
Entrez_Gene (NCBI)METTL18  92342  methyltransferase like 18
AliasesAsTP2; C1orf156; HPM1
GeneCards (Weizmann)METTL18
Ensembl hg19 (Hinxton)ENSG00000171806 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171806 [Gene_View]  chr1:169792532-169794976 [Contig_View]  METTL18 [Vega]
ICGC DataPortalENSG00000171806
TCGA cBioPortalMETTL18
AceView (NCBI)METTL18
Genatlas (Paris)METTL18
WikiGenes92342
SOURCE (Princeton)METTL18
Genetics Home Reference (NIH)METTL18
Genomic and cartography
GoldenPath hg38 (UCSC)METTL18  -     chr1:169792532-169794976 -  1q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)METTL18  -     1q24.2   [Description]    (hg19-Feb_2009)
EnsemblMETTL18 - 1q24.2 [CytoView hg19]  METTL18 - 1q24.2 [CytoView hg38]
Mapping of homologs : NCBIMETTL18 [Mapview hg19]  METTL18 [Mapview hg38]
OMIM615255   
Gene and transcription
Genbank (Entrez)AK313909 AL035369 AL556604 AY744366 BC008679
RefSeq transcript (Entrez)NM_001320199 NM_001320201 NM_033418
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)METTL18
Cluster EST : UnigeneHs.33922 [ NCBI ]
CGAP (NCI)Hs.33922
Alternative Splicing GalleryENSG00000171806
Gene ExpressionMETTL18 [ NCBI-GEO ]   METTL18 [ EBI - ARRAY_EXPRESS ]   METTL18 [ SEEK ]   METTL18 [ MEM ]
Gene Expression Viewer (FireBrowse)METTL18 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)92342
GTEX Portal (Tissue expression)METTL18
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95568   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95568  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95568
Splice isoforms : SwissVarO95568
Catalytic activity : Enzyme2.1.1.- [ Enzyme-Expasy ]   2.1.1.-2.1.1.- [ IntEnz-EBI ]   2.1.1.- [ BRENDA ]   2.1.1.- [ KEGG ]   
PhosPhoSitePlusO95568
Domains : Interpro (EBI)SAM-dependent_MTases   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)METTL18
DMDM Disease mutations92342
Blocks (Seattle)METTL18
PDB (SRS)4RFQ   
PDB (PDBSum)4RFQ   
PDB (IMB)4RFQ   
PDB (RSDB)4RFQ   
Structural Biology KnowledgeBase4RFQ   
SCOP (Structural Classification of Proteins)4RFQ   
CATH (Classification of proteins structures)4RFQ   
SuperfamilyO95568
Human Protein AtlasENSG00000171806
Peptide AtlasO95568
HPRD14713
IPIIPI00009815   IPI00641966   
Protein Interaction databases
DIP (DOE-UCLA)O95568
IntAct (EBI)O95568
FunCoupENSG00000171806
BioGRIDMETTL18
STRING (EMBL)METTL18
ZODIACMETTL18
Ontologies - Pathways
QuickGOO95568
Ontology : AmiGOmethyltransferase activity  methylation  
Ontology : EGO-EBImethyltransferase activity  methylation  
NDEx NetworkMETTL18
Atlas of Cancer Signalling NetworkMETTL18
Wikipedia pathwaysMETTL18
Orthology - Evolution
OrthoDB92342
GeneTree (enSembl)ENSG00000171806
Phylogenetic Trees/Animal Genes : TreeFamMETTL18
HOVERGENO95568
HOGENOMO95568
Homologs : HomoloGeneMETTL18
Homology/Alignments : Family Browser (UCSC)METTL18
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMETTL18 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)METTL18
dbVarMETTL18
ClinVarMETTL18
1000_GenomesMETTL18 
Exome Variant ServerMETTL18
ExAC (Exome Aggregation Consortium)METTL18 (select the gene name)
Genetic variants : HAPMAP92342
Genomic Variants (DGV)METTL18 [DGVbeta]
DECIPHERMETTL18 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMETTL18 
Mutations
ICGC Data PortalMETTL18 
TCGA Data PortalMETTL18 
Broad Tumor PortalMETTL18
OASIS PortalMETTL18 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMETTL18  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMETTL18
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch METTL18
DgiDB (Drug Gene Interaction Database)METTL18
DoCM (Curated mutations)METTL18 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)METTL18 (select a term)
intoGenMETTL18
Cancer3DMETTL18(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615255   
Orphanet
MedgenMETTL18
Genetic Testing Registry METTL18
NextProtO95568 [Medical]
TSGene92342
GENETestsMETTL18
Target ValidationMETTL18
Huge Navigator METTL18 [HugePedia]
snp3D : Map Gene to Disease92342
BioCentury BCIQMETTL18
ClinGenMETTL18
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD92342
Chemical/Pharm GKB GenePA142672407
Clinical trialMETTL18
Miscellaneous
canSAR (ICR)METTL18 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMETTL18
EVEXMETTL18
GoPubMedMETTL18
iHOPMETTL18
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:25:54 CEST 2017

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