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METTL21EP (methyltransferase like 21E, pseudogene)

Identity

Alias_namesMETTL21CP1
methyltransferase like 21C pseudogene 1
Other alias
HGNC (Hugo) METTL21EP
LocusID (NCBI) 121952
Atlas_Id 68917
Location 13q33.1  [Link to chromosome band 13q33]
Location_base_pair Starts at 103532449 and ends at 103548383 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)METTL21EP   41948
Cards
Entrez_Gene (NCBI)METTL21EP  121952  methyltransferase like 21E, pseudogene
AliasesMETTL21CP1
GeneCards (Weizmann)METTL21EP
Ensembl hg19 (Hinxton)ENSG00000250878 [Gene_View]  chr13:103532449-103548383 [Contig_View]  METTL21EP [Vega]
Ensembl hg38 (Hinxton)ENSG00000250878 [Gene_View]  chr13:103532449-103548383 [Contig_View]  METTL21EP [Vega]
ICGC DataPortalENSG00000250878
TCGA cBioPortalMETTL21EP
AceView (NCBI)METTL21EP
Genatlas (Paris)METTL21EP
WikiGenes121952
SOURCE (Princeton)METTL21EP
Genetics Home Reference (NIH)METTL21EP
Genomic and cartography
GoldenPath hg19 (UCSC)METTL21EP  -     chr13:103532449-103548383 +  13q33.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)METTL21EP  -     13q33.1   [Description]    (hg38-Dec_2013)
EnsemblMETTL21EP - 13q33.1 [CytoView hg19]  METTL21EP - 13q33.1 [CytoView hg38]
Mapping of homologs : NCBIMETTL21EP [Mapview hg19]  METTL21EP [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096424
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000013 NC_018924 NT_009952 NW_004929389
Consensus coding sequences : CCDS (NCBI)METTL21EP
Cluster EST : UnigeneHs.660773 [ NCBI ]
CGAP (NCI)Hs.660773
Alternative Splicing GalleryENSG00000250878
Gene ExpressionMETTL21EP [ NCBI-GEO ]   METTL21EP [ EBI - ARRAY_EXPRESS ]   METTL21EP [ SEEK ]   METTL21EP [ MEM ]
Gene Expression Viewer (FireBrowse)METTL21EP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)121952
GTEX Portal (Tissue expression)METTL21EP
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NDL7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NDL7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NDL7
Splice isoforms : SwissVarA6NDL7
PhosPhoSitePlusA6NDL7
Domains : Interpro (EBI)Nicotinamide_N-MeTfrase-like    SAM-dependent_MTases   
Domain families : Pfam (Sanger)Methyltransf_16 (PF10294)   
Domain families : Pfam (NCBI)pfam10294   
Conserved Domain (NCBI)METTL21EP
DMDM Disease mutations121952
Blocks (Seattle)METTL21EP
SuperfamilyA6NDL7
Human Protein AtlasENSG00000250878
Peptide AtlasA6NDL7
IPIIPI00186395   
Protein Interaction databases
DIP (DOE-UCLA)A6NDL7
IntAct (EBI)A6NDL7
FunCoupENSG00000250878
BioGRIDMETTL21EP
STRING (EMBL)METTL21EP
ZODIACMETTL21EP
Ontologies - Pathways
QuickGOA6NDL7
Ontology : AmiGOmethyltransferase activity  methylation  
Ontology : EGO-EBImethyltransferase activity  methylation  
NDEx NetworkMETTL21EP
Atlas of Cancer Signalling NetworkMETTL21EP
Wikipedia pathwaysMETTL21EP
Orthology - Evolution
OrthoDB121952
GeneTree (enSembl)ENSG00000250878
Phylogenetic Trees/Animal Genes : TreeFamMETTL21EP
HOVERGENA6NDL7
HOGENOMA6NDL7
Homologs : HomoloGeneMETTL21EP
Homology/Alignments : Family Browser (UCSC)METTL21EP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMETTL21EP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)METTL21EP
dbVarMETTL21EP
ClinVarMETTL21EP
1000_GenomesMETTL21EP 
Exome Variant ServerMETTL21EP
ExAC (Exome Aggregation Consortium)METTL21EP (select the gene name)
Genetic variants : HAPMAP121952
Genomic Variants (DGV)METTL21EP [DGVbeta]
DECIPHER (Syndromes)13:103532449-103548383  ENSG00000250878
CONAN: Copy Number AnalysisMETTL21EP 
Mutations
ICGC Data PortalMETTL21EP 
TCGA Data PortalMETTL21EP 
Broad Tumor PortalMETTL21EP
OASIS PortalMETTL21EP [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMETTL21EP
BioMutasearch METTL21EP
DgiDB (Drug Gene Interaction Database)METTL21EP
DoCM (Curated mutations)METTL21EP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)METTL21EP (select a term)
intoGenMETTL21EP
Cancer3DMETTL21EP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMETTL21EP
Genetic Testing Registry METTL21EP
NextProtA6NDL7 [Medical]
TSGene121952
GENETestsMETTL21EP
Huge Navigator METTL21EP [HugePedia]
snp3D : Map Gene to Disease121952
BioCentury BCIQMETTL21EP
ClinGenMETTL21EP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD121952
Clinical trialMETTL21EP
Miscellaneous
canSAR (ICR)METTL21EP (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMETTL21EP
EVEXMETTL21EP
GoPubMedMETTL21EP
iHOPMETTL21EP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:28:05 CET 2017

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