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METTL22 (methyltransferase like 22)

Identity

Alias_namesC16orf68
chromosome 16 open reading frame 68
Alias_symbol (synonym)FLJ12433
MGC2654
Other alias
HGNC (Hugo) METTL22
LocusID (NCBI) 79091
Atlas_Id 68918
Location 16p13.2  [Link to chromosome band 16p13]
Location_base_pair Starts at 8715527 and ends at 8740079 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)METTL22   28368
Cards
Entrez_Gene (NCBI)METTL22  79091  methyltransferase like 22
AliasesC16orf68
GeneCards (Weizmann)METTL22
Ensembl hg19 (Hinxton)ENSG00000067365 [Gene_View]  chr16:8715527-8740079 [Contig_View]  METTL22 [Vega]
Ensembl hg38 (Hinxton)ENSG00000067365 [Gene_View]  chr16:8715527-8740079 [Contig_View]  METTL22 [Vega]
ICGC DataPortalENSG00000067365
TCGA cBioPortalMETTL22
AceView (NCBI)METTL22
Genatlas (Paris)METTL22
WikiGenes79091
SOURCE (Princeton)METTL22
Genetics Home Reference (NIH)METTL22
Genomic and cartography
GoldenPath hg19 (UCSC)METTL22  -     chr16:8715527-8740079 +  16p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)METTL22  -     16p13.2   [Description]    (hg38-Dec_2013)
EnsemblMETTL22 - 16p13.2 [CytoView hg19]  METTL22 - 16p13.2 [CytoView hg38]
Mapping of homologs : NCBIMETTL22 [Mapview hg19]  METTL22 [Mapview hg38]
OMIM615261   
Gene and transcription
Genbank (Entrez)AK022495 AK315383 AY203956 BC001908 BC103725
RefSeq transcript (Entrez)NM_024109
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010393 NW_004929400
Consensus coding sequences : CCDS (NCBI)METTL22
Cluster EST : UnigeneHs.306380 [ NCBI ]
CGAP (NCI)Hs.306380
Alternative Splicing GalleryENSG00000067365
Gene ExpressionMETTL22 [ NCBI-GEO ]   METTL22 [ EBI - ARRAY_EXPRESS ]   METTL22 [ SEEK ]   METTL22 [ MEM ]
Gene Expression Viewer (FireBrowse)METTL22 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79091
GTEX Portal (Tissue expression)METTL22
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BUU2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BUU2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BUU2
Splice isoforms : SwissVarQ9BUU2
PhosPhoSitePlusQ9BUU2
Domains : Interpro (EBI)Nicotinamide_N-MeTfrase-like    SAM-dependent_MTases   
Domain families : Pfam (Sanger)Methyltransf_16 (PF10294)   
Domain families : Pfam (NCBI)pfam10294   
Conserved Domain (NCBI)METTL22
DMDM Disease mutations79091
Blocks (Seattle)METTL22
SuperfamilyQ9BUU2
Human Protein AtlasENSG00000067365
Peptide AtlasQ9BUU2
HPRD08324
IPIIPI00845313   IPI00042612   IPI00845325   
Protein Interaction databases
DIP (DOE-UCLA)Q9BUU2
IntAct (EBI)Q9BUU2
FunCoupENSG00000067365
BioGRIDMETTL22
STRING (EMBL)METTL22
ZODIACMETTL22
Ontologies - Pathways
QuickGOQ9BUU2
Ontology : AmiGOnucleus  methyltransferase activity  methylation  
Ontology : EGO-EBInucleus  methyltransferase activity  methylation  
NDEx NetworkMETTL22
Atlas of Cancer Signalling NetworkMETTL22
Wikipedia pathwaysMETTL22
Orthology - Evolution
OrthoDB79091
GeneTree (enSembl)ENSG00000067365
Phylogenetic Trees/Animal Genes : TreeFamMETTL22
HOVERGENQ9BUU2
HOGENOMQ9BUU2
Homologs : HomoloGeneMETTL22
Homology/Alignments : Family Browser (UCSC)METTL22
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMETTL22 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)METTL22
dbVarMETTL22
ClinVarMETTL22
1000_GenomesMETTL22 
Exome Variant ServerMETTL22
ExAC (Exome Aggregation Consortium)METTL22 (select the gene name)
Genetic variants : HAPMAP79091
Genomic Variants (DGV)METTL22 [DGVbeta]
DECIPHER (Syndromes)16:8715527-8740079  ENSG00000067365
CONAN: Copy Number AnalysisMETTL22 
Mutations
ICGC Data PortalMETTL22 
TCGA Data PortalMETTL22 
Broad Tumor PortalMETTL22
OASIS PortalMETTL22 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMETTL22  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMETTL22
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch METTL22
DgiDB (Drug Gene Interaction Database)METTL22
DoCM (Curated mutations)METTL22 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)METTL22 (select a term)
intoGenMETTL22
Cancer3DMETTL22(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615261   
Orphanet
MedgenMETTL22
Genetic Testing Registry METTL22
NextProtQ9BUU2 [Medical]
TSGene79091
GENETestsMETTL22
Huge Navigator METTL22 [HugePedia]
snp3D : Map Gene to Disease79091
BioCentury BCIQMETTL22
ClinGenMETTL22
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79091
Chemical/Pharm GKB GenePA144596479
Clinical trialMETTL22
Miscellaneous
canSAR (ICR)METTL22 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMETTL22
EVEXMETTL22
GoPubMedMETTL22
iHOPMETTL22
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:28:05 CET 2017

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