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METTL27 (methyltransferase like 27)

Identity

Alias_namesWBSCR27
Williams Beuren syndrome chromosome region 27
Other alias
HGNC (Hugo) METTL27
LocusID (NCBI) 155368
Atlas_Id 79407
Location 7q11.23  [Link to chromosome band 7q11]
Location_base_pair Starts at 73834591 and ends at 73842525 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)METTL27   19068
Cards
Entrez_Gene (NCBI)METTL27  155368  methyltransferase like 27
AliasesWBSCR27
GeneCards (Weizmann)METTL27
Ensembl hg19 (Hinxton)ENSG00000165171 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165171 [Gene_View]  chr7:73834591-73842525 [Contig_View]  METTL27 [Vega]
ICGC DataPortalENSG00000165171
TCGA cBioPortalMETTL27
AceView (NCBI)METTL27
Genatlas (Paris)METTL27
WikiGenes155368
SOURCE (Princeton)METTL27
Genetics Home Reference (NIH)METTL27
Genomic and cartography
GoldenPath hg38 (UCSC)METTL27  -     chr7:73834591-73842525 -  7q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)METTL27  -     7q11.23   [Description]    (hg19-Feb_2009)
EnsemblMETTL27 - 7q11.23 [CytoView hg19]  METTL27 - 7q11.23 [CytoView hg38]
Mapping of homologs : NCBIMETTL27 [Mapview hg19]  METTL27 [Mapview hg38]
OMIM612546   
Gene and transcription
Genbank (Entrez)AF534110 AK301597 AY354928 BC030295 DQ894655
RefSeq transcript (Entrez)NM_152559
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)METTL27
Cluster EST : UnigeneHs.647042 [ NCBI ]
CGAP (NCI)Hs.647042
Alternative Splicing GalleryENSG00000165171
Gene ExpressionMETTL27 [ NCBI-GEO ]   METTL27 [ EBI - ARRAY_EXPRESS ]   METTL27 [ SEEK ]   METTL27 [ MEM ]
Gene Expression Viewer (FireBrowse)METTL27 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)155368
GTEX Portal (Tissue expression)METTL27
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N6F8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N6F8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N6F8
Splice isoforms : SwissVarQ8N6F8
PhosPhoSitePlusQ8N6F8
Domains : Interpro (EBI)SAM-dependent_MTases   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)METTL27
DMDM Disease mutations155368
Blocks (Seattle)METTL27
SuperfamilyQ8N6F8
Human Protein AtlasENSG00000165171
Peptide AtlasQ8N6F8
IPIIPI00167004   IPI00910294   
Protein Interaction databases
DIP (DOE-UCLA)Q8N6F8
IntAct (EBI)Q8N6F8
FunCoupENSG00000165171
BioGRIDMETTL27
STRING (EMBL)METTL27
ZODIACMETTL27
Ontologies - Pathways
QuickGOQ8N6F8
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkMETTL27
Atlas of Cancer Signalling NetworkMETTL27
Wikipedia pathwaysMETTL27
Orthology - Evolution
OrthoDB155368
GeneTree (enSembl)ENSG00000165171
Phylogenetic Trees/Animal Genes : TreeFamMETTL27
HOVERGENQ8N6F8
HOGENOMQ8N6F8
Homologs : HomoloGeneMETTL27
Homology/Alignments : Family Browser (UCSC)METTL27
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMETTL27 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)METTL27
dbVarMETTL27
ClinVarMETTL27
1000_GenomesMETTL27 
Exome Variant ServerMETTL27
ExAC (Exome Aggregation Consortium)METTL27 (select the gene name)
Genetic variants : HAPMAP155368
Genomic Variants (DGV)METTL27 [DGVbeta]
DECIPHERMETTL27 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMETTL27 
Mutations
ICGC Data PortalMETTL27 
TCGA Data PortalMETTL27 
Broad Tumor PortalMETTL27
OASIS PortalMETTL27 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMETTL27
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch METTL27
DgiDB (Drug Gene Interaction Database)METTL27
DoCM (Curated mutations)METTL27 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)METTL27 (select a term)
intoGenMETTL27
Cancer3DMETTL27(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612546   
Orphanet
MedgenMETTL27
Genetic Testing Registry METTL27
NextProtQ8N6F8 [Medical]
TSGene155368
GENETestsMETTL27
Target ValidationMETTL27
Huge Navigator METTL27 [HugePedia]
snp3D : Map Gene to Disease155368
BioCentury BCIQMETTL27
ClinGenMETTL27
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD155368
Chemical/Pharm GKB GenePA134905115
Clinical trialMETTL27
Miscellaneous
canSAR (ICR)METTL27 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMETTL27
EVEXMETTL27
GoPubMedMETTL27
iHOPMETTL27
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:27:14 CEST 2017

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